Pull requests: snakemake/snakemake
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fix: check template rendering output for leaked input file paths
#2850
opened Apr 26, 2024 by
johanneskoester
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chore(main): release 8.11.1
autorelease: pending
#2849
opened Apr 26, 2024 by
github-actions
bot
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fix: use keyword arguments in
_IOFile.open
#2847
opened Apr 26, 2024 by
J-Wall
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fix: checkpoints inside modules are overwritten
bug
Something isn't working
help wanted
Extra attention is needed
#2843
opened Apr 24, 2024 by
fgvieira
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fix: replace pkg_resources for python 3.12
#2831
opened Apr 21, 2024 by
branchvincent
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2 tasks
fix: return set instead of list when just --quiet
#2829
opened Apr 20, 2024 by
cademirch
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fix: Prevent binary log files to crash snakemake execution with
show-failed-logs
#2827
opened Apr 19, 2024 by
votti
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fix: remove extra call to setup_logger()
#2809
opened Apr 13, 2024 by
cademirch
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fix: #2750, does not correctly check time stamps of scripts with wildcards
#2751
opened Mar 12, 2024 by
mawenzy
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chore(deps): bump marocchino/sticky-pull-request-comment from 2.8.0 to 2.9.0
dependencies
Pull requests that update a dependency file
#2675
opened Feb 5, 2024 by
dependabot
bot
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feat: add support for comma in wildcards
#2659
opened Jan 30, 2024 by
Feelx234
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2 tasks done
feat: allow input url passthrough to executor backend
#2639
opened Jan 22, 2024 by
KrKOo
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2 tasks
feat: allow definition of access pattern for input files
#2597
opened Jan 9, 2024 by
johanneskoester
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2 tasks
chore(deps): bump vegardit/fast-apt-mirror.sh from 1.0.0 to 1.1.0
dependencies
Pull requests that update a dependency file
#2592
opened Jan 8, 2024 by
dependabot
bot
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feat: add function to get unnamed arguments from input output files
#2509
opened Nov 10, 2023 by
SilasK
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1 of 2 tasks
chore(deps): Bump amannn/action-semantic-pull-request from 5.0.2 to 5.4.0
dependencies
Pull requests that update a dependency file
#2505
opened Nov 6, 2023 by
dependabot
bot
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fix: 'infinite' value cannot pass to R script
#2476
opened Oct 11, 2023 by
ghbore
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feat!: Let wrapper log to stderr and stout file seperately.
#2474
opened Oct 10, 2023 by
SilasK
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Compiled
workflow.include should carry print_compilation keyword
#2469
opened Oct 4, 2023 by
kennyworkman
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