Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data

COVID-Net Open Source Initiative

Nextstrain build for novel coronavirus SARS-CoV-2

Models of COVID-19 outbreak trajectories and hospital demand

🦠 Huge collection of useful projects and resources for COVID-19 (2019 novel Coronavirus)

Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

query stats of infected coronavirus cases

Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

Assembly and intrahost/low-frequency variant calling for viral samples

Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Ran…

A collaborative review of the emerging COVID-19 literature. Join the chat here:

Folding@home COVID-19 efforts

COVID-19 Detection Chest X-rays and CT scans: COVID-19 Detection based on Chest X-rays and CT Scans using four Transfer Learning algorithms: VGG16, ResNet50, InceptionV3, Xception. The models were trained for 500 epochs on around 1000 Chest X-rays and around 750 CT Scan images on Google Colab GPU. A Flask App was later developed wherein user can…

🫁 The world's first open-source ventilator tested on human patients. Mass-producible at a low cost (~2000€).

Unified COVID-19 Dataset

PyRoss: inference, forecasts, and optimised control of epidemiological models in Python

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

A global collection of Open Source projects during COVID-19

MolSSI SARS-CoV-2 Biomolecular Simulation Data and Algorithm Store

COVID-Net Open Source Initiative - Models and Data for COVID-19 Detection in Chest CT