An example on how to use reactome Rest API
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Updated
Dec 4, 2017 - Jupyter Notebook
An example on how to use reactome Rest API
Google Summer Of Code 2020.
A set of GO-CAMs built automatically from Reactome pathways.
This fork is intended solely for generating a GSEA jar file that is compatible with Reactome.
Research into statistical distributions of genomes, proteomes and reactomes
Service to generate images of top level pathway view (the fireworks).
A research biochemical network explorer and genetic cytohistological encyclopedia.
pathfinder http://reactome.org/ graph binding
Integration of pathway-related information from Reactome in BEL
PathwayMatcher is a free, open-source software to search for pathways related to a list of proteins in Reactome. This repository is the development repository. For the latest version see: https://github.com/PathwayAnalysisPlatform/PathwayMatcher
Deposited R scripts allow to execute a complete RNA-seq Pipeline, starting from sequence reads (FASTQ files) to mapping/annotate the genome using a reference, to counts the number of reads for every gene. when raw counts are obtained, DESeq2 module permits to find differentially expressed genes (DEG) and to perform statistical analysis. The last…
Converting SBGN-encoded pathways to the SIF file format
Python implementation of a bipartite directed multigraph extracted from the Reactome biological pathway database.
rbioapi: User-Friendly R Interface to Biologic Web Services' API
Converting SBGN encoded pathways to the SIF file format
A compilation of pathway gene sets
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