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Sea lion urine comparison with spectral counting.
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Sep 2, 2019 - HTML
A large-scale spectral counting data analysis using PAW pipeline, edgeR, R, and Jupyter notebooks
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Sep 6, 2019 - Jupyter Notebook
A quick recap of widely used differential analyses methods in R for RNA-seq experiments
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Mar 12, 2020
Some of the analytical processes and tools we use to provide rigorous and actionable results to our clients.
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Nov 2, 2020 - R
Galaxy wrappers for SARTools (Statistical Analysis of RNA-Seq Tools)
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Jan 6, 2021 - R
Differential expression analysis: DESeq2, edgeR, limma. Realized in python based on rpy2
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May 7, 2021 - Jupyter Notebook
Snakemake workflow for Bulk RNASeq at both genome level and transcripts level.
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Mar 31, 2022 - R
Rstudio files created during my internship at IAB. Internship supervised by Florent Chuffart.
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Apr 12, 2022 - R
Transcriptome Analysis of Heat and Drought-Stressed Wheat
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Oct 15, 2022 - Jupyter Notebook
Perform RNA-seq data analysis with edgeR package of bioconductor
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Feb 27, 2023 - R
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Mar 1, 2023 - JavaScript
Analyses combining ATAC-seq, RRBS, and RNA-seq data for purple urchins
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Mar 13, 2023 - R
Some of the analytical processes and tools we use to provide rigorous and actionable results to our clients.
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Mar 21, 2023 - R
Generate HTML report for a set of genomic regions or DESeq2/edgeR results
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May 7, 2023 - R
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