Supplementary information/data for Pritchard & Birch (2014) doi:10.1111/mpp.12210

Random trees created using a 3D sprite-based L-system

Protein Synthesis Project Using Python, BioPython, and BioSQL

Model, Data, and Analysis for "Negative Niche Construction Favors the Evolution of Cooperation"

Vim syntax for Kappa executable knowledge simulator

Model, configuration, data, analysis, and figures for Resource Abundance and the Critical Transition to Cooperation

An organism simulation framework based on cell growth and resultant emergent phenomena.

A model of a DNA supercoiling insulator in a transcription-translation system

The Drosophila melanogaster gap genes circuit simulator, coupled with Scatter Search optimization algorithm

A simple python web application modeling certain kind of gene transformations

HOME OF THE 2-SPEED GENOME MODEL

Ventricular Tissue Simulator

Simulations for apoptosis analysis relevant to Quantitative Biology.

The aim is to create an interactive simulation that can be used by a biologist who has little to no background in computation/programming to simulate all combinations of evolutionary factors while allowing her to control as many parameters as practical.

Openfoam library for physiological flow. Solvers and boundary conditions.

To find out more about this project, checkout my website!

NPMP 2017/18 - BIO seminar D master-slave flip-flop

An object-oriented model of the workings of the human body written in java and scala

Simulating a primordial brain. A biological (spiking) neural network structuring itself through natural selection.