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perf: autobump bio/bedtools/merge #1348

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merged 1 commit into from May 12, 2023
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Automatic update of bio/bedtools/merge.

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Automatically approving successfull autobump

@mergify mergify bot merged commit 46ba353 into master May 12, 2023
6 checks passed
@mergify mergify bot deleted the autobump/bio-bedtools-merge branch May 12, 2023 00:24
johanneskoester pushed a commit that referenced this pull request May 13, 2023
🤖 I have created a release \*beep\* \*boop\*
---
##
[1.30.0](https://www.github.com/snakemake/snakemake-wrappers/compare/v1.29.0...v1.30.0)
(2023-05-12)


### Features

* add memory inference to samtools sort
([#1208](https://www.github.com/snakemake/snakemake-wrappers/issues/1208))
([d70a806](https://www.github.com/snakemake/snakemake-wrappers/commit/d70a80650c640ab37e21690bd9c90dc581d2ec4e))
* deeptools bamcoverage
([#1237](https://www.github.com/snakemake/snakemake-wrappers/issues/1237))
([ee2413b](https://www.github.com/snakemake/snakemake-wrappers/commit/ee2413b7f4e5576692330821f3cdd8829d731144))
* deeptools plotcoverage
([#1241](https://www.github.com/snakemake/snakemake-wrappers/issues/1241))
([d08e4c6](https://www.github.com/snakemake/snakemake-wrappers/commit/d08e4c6908347ff979ff512f6523368ed9fc0df2))
* DeseqDataSet from multiple input
([#1326](https://www.github.com/snakemake/snakemake-wrappers/issues/1326))
([25d8a07](https://www.github.com/snakemake/snakemake-wrappers/commit/25d8a076bc6830bfcf58d7a5999b68a790879f9a))
* Gffread
([#1291](https://www.github.com/snakemake/snakemake-wrappers/issues/1291))
([d613ddf](https://www.github.com/snakemake/snakemake-wrappers/commit/d613ddffa7f78f5697e836e71ce2e51f232c1884))
* Salmon-Tximport meta-wrapper
([#1270](https://www.github.com/snakemake/snakemake-wrappers/issues/1270))
([1e31da2](https://www.github.com/snakemake/snakemake-wrappers/commit/1e31da29769eebefdff470ae24598eb479547bca))


### Bug Fixes

* auto memory calculation
([#1210](https://www.github.com/snakemake/snakemake-wrappers/issues/1210))
([b08081f](https://www.github.com/snakemake/snakemake-wrappers/commit/b08081fc066b10040fcd94a8f9fd1b70099a6f54))
* ensembl annotation GRCh37 gft release
([#1296](https://www.github.com/snakemake/snakemake-wrappers/issues/1296))
([d5be001](https://www.github.com/snakemake/snakemake-wrappers/commit/d5be001cfdd5cd85fdbd19abe15de43310f9bfed))
* fixed bug when formatting string in GATK denoisereadcounts
([#1343](https://www.github.com/snakemake/snakemake-wrappers/issues/1343))
([8cc5d91](https://www.github.com/snakemake/snakemake-wrappers/commit/8cc5d91f0b459ef18d461367a449c9bf5c901571))


### Performance Improvements

* autobump bio/bcftools/call
([#1349](https://www.github.com/snakemake/snakemake-wrappers/issues/1349))
([064d4a4](https://www.github.com/snakemake/snakemake-wrappers/commit/064d4a469e8a3be063c7ac2b4916127c1f4b9abf))
* autobump bio/bcftools/reheader
([#1362](https://www.github.com/snakemake/snakemake-wrappers/issues/1362))
([bc4bb1d](https://www.github.com/snakemake/snakemake-wrappers/commit/bc4bb1deb95a5cab588c34b55e03496a5242dcf3))
* autobump bio/bcftools/stats
([#1361](https://www.github.com/snakemake/snakemake-wrappers/issues/1361))
([444b198](https://www.github.com/snakemake/snakemake-wrappers/commit/444b198e0a97483ce66011a0cb022166d6d45ed2))
* autobump bio/bedtools/genomecov
([#1351](https://www.github.com/snakemake/snakemake-wrappers/issues/1351))
([f39d37d](https://www.github.com/snakemake/snakemake-wrappers/commit/f39d37dd38dc6a1e672b901278cf8774a132f4c2))
* autobump bio/bedtools/merge
([#1348](https://www.github.com/snakemake/snakemake-wrappers/issues/1348))
([46ba353](https://www.github.com/snakemake/snakemake-wrappers/commit/46ba35317bd292816fbc833ca43b2bc50485a0a9))
* autobump bio/bedtools/sort
([#1357](https://www.github.com/snakemake/snakemake-wrappers/issues/1357))
([e17cb5a](https://www.github.com/snakemake/snakemake-wrappers/commit/e17cb5a405d0d770749969cd89a0bcc58179f292))
* autobump bio/bismark/bam2nuc
([#1341](https://www.github.com/snakemake/snakemake-wrappers/issues/1341))
([ce2b39e](https://www.github.com/snakemake/snakemake-wrappers/commit/ce2b39e65752a5088088c65d67abe3fa4d01a0dc))
* autobump bio/bismark/bismark2report
([#1334](https://www.github.com/snakemake/snakemake-wrappers/issues/1334))
([d497124](https://www.github.com/snakemake/snakemake-wrappers/commit/d497124a689d436169dd360e674bd7af7bfc7fa9))
* autobump bio/bowtie2/align
([#1356](https://www.github.com/snakemake/snakemake-wrappers/issues/1356))
([0e6cc68](https://www.github.com/snakemake/snakemake-wrappers/commit/0e6cc68ed2499215903a1adb1e83c883f6d73277))
* autobump bio/busco
([#1359](https://www.github.com/snakemake/snakemake-wrappers/issues/1359))
([41f1185](https://www.github.com/snakemake/snakemake-wrappers/commit/41f1185ee23cd2810022510a2d89f4ea39212a44))
* autobump bio/bwa/samxe
([#1335](https://www.github.com/snakemake/snakemake-wrappers/issues/1335))
([8042216](https://www.github.com/snakemake/snakemake-wrappers/commit/80422161ea03b1d8a1f513f7562b7cbe6667a952))
* autobump bio/deeptools/plotfingerprint
([#1345](https://www.github.com/snakemake/snakemake-wrappers/issues/1345))
([39f88b7](https://www.github.com/snakemake/snakemake-wrappers/commit/39f88b73d148b02436d7476642ca24b02201e6d6))
* autobump bio/gatk/applybqsr
([#1339](https://www.github.com/snakemake/snakemake-wrappers/issues/1339))
([ec62a41](https://www.github.com/snakemake/snakemake-wrappers/commit/ec62a41f3ece28922bc9a35edec5c44997006320))
* autobump bio/gatk/splitncigarreads
([#1350](https://www.github.com/snakemake/snakemake-wrappers/issues/1350))
([7a7eb1e](https://www.github.com/snakemake/snakemake-wrappers/commit/7a7eb1e46b65843a295055c6cd74fe49ee68466c))
* autobump bio/gatk/variantfiltration
([#1340](https://www.github.com/snakemake/snakemake-wrappers/issues/1340))
([d108c9c](https://www.github.com/snakemake/snakemake-wrappers/commit/d108c9c0adc28b8b7bac14b418f1f79df91a90a5))
* autobump bio/manta
([#1342](https://www.github.com/snakemake/snakemake-wrappers/issues/1342))
([a23858a](https://www.github.com/snakemake/snakemake-wrappers/commit/a23858aa5e6980e559ee8cb02f0a54208af9eef5))
* autobump bio/minimap2/aligner
([#1329](https://www.github.com/snakemake/snakemake-wrappers/issues/1329))
([45c53eb](https://www.github.com/snakemake/snakemake-wrappers/commit/45c53eba9041a28745c2d678638827b0b2537667))
* autobump bio/open-cravat/run
([#1330](https://www.github.com/snakemake/snakemake-wrappers/issues/1330))
([fc82508](https://www.github.com/snakemake/snakemake-wrappers/commit/fc82508898e6de6c5f673f1a3044bda7fe02d656))
* autobump bio/picard/addorreplacereadgroups
([#1333](https://www.github.com/snakemake/snakemake-wrappers/issues/1333))
([d273596](https://www.github.com/snakemake/snakemake-wrappers/commit/d27359682dbe2a4c411971e09c72079a9d803dfb))
* autobump bio/picard/collectinsertsizemetrics
([#1352](https://www.github.com/snakemake/snakemake-wrappers/issues/1352))
([ae1e2bd](https://www.github.com/snakemake/snakemake-wrappers/commit/ae1e2bd62f7a6683c495abc70cd9dd1773b683f4))
* autobump bio/rasusa
([#1353](https://www.github.com/snakemake/snakemake-wrappers/issues/1353))
([3c41241](https://www.github.com/snakemake/snakemake-wrappers/commit/3c4124152e9b49bd02f944707e47517d6e7826dc))
* autobump bio/samtools/fastx
([#1347](https://www.github.com/snakemake/snakemake-wrappers/issues/1347))
([d6e6329](https://www.github.com/snakemake/snakemake-wrappers/commit/d6e63291192027c7c4c994d8d5e2dee6f727b5cb))
* autobump bio/seqkit/fx2tab
([#1338](https://www.github.com/snakemake/snakemake-wrappers/issues/1338))
([53922ca](https://www.github.com/snakemake/snakemake-wrappers/commit/53922ca8c2a7ad2da5c17a39fb98e724dff56df5))
* autobump bio/snpeff/annotate
([#1363](https://www.github.com/snakemake/snakemake-wrappers/issues/1363))
([9ba0b3d](https://www.github.com/snakemake/snakemake-wrappers/commit/9ba0b3ddd02f784df8eddd203a5619362c88f36f))
* autobump bio/snpeff/download
([#1358](https://www.github.com/snakemake/snakemake-wrappers/issues/1358))
([2c5a385](https://www.github.com/snakemake/snakemake-wrappers/commit/2c5a385ad1d499d183a6075d1c274d7beab14621))
* autobump bio/sourmash/compute
([#1360](https://www.github.com/snakemake/snakemake-wrappers/issues/1360))
([1ec19c2](https://www.github.com/snakemake/snakemake-wrappers/commit/1ec19c22df58905271b50399b8b1d83e94801fe3))
* autobump bio/sra-tools/fasterq-dump
([#1355](https://www.github.com/snakemake/snakemake-wrappers/issues/1355))
([d1118bd](https://www.github.com/snakemake/snakemake-wrappers/commit/d1118bd4f59c1315b99539c8b2d99bb1ac86326c))
* autobump bio/tabix/index
([#1336](https://www.github.com/snakemake/snakemake-wrappers/issues/1336))
([dfab9c6](https://www.github.com/snakemake/snakemake-wrappers/commit/dfab9c6aa5e50596d7348553d8414c534130f5f8))
* autobump bio/vembrane/table
([#1337](https://www.github.com/snakemake/snakemake-wrappers/issues/1337))
([953c0dc](https://www.github.com/snakemake/snakemake-wrappers/commit/953c0dcdedc8ebbaff96e139c93d5c2aef3ad87f))
* autobump bio/vep/plugins
([#1346](https://www.github.com/snakemake/snakemake-wrappers/issues/1346))
([887ba11](https://www.github.com/snakemake/snakemake-wrappers/commit/887ba11f0be215ddf0110d6ba31de4a0eb93056c))
* autobump bio/vg/sim
([#1332](https://www.github.com/snakemake/snakemake-wrappers/issues/1332))
([91574fd](https://www.github.com/snakemake/snakemake-wrappers/commit/91574fd8795d55ff9e60b35f884c4f2cd7956b54))
---


This PR was generated with [Release
Please](https://github.com/googleapis/release-please). See
[documentation](https://github.com/googleapis/release-please#release-please).

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
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