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68 Open 63 Closed
68 Open 63 Closed
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Issues list

Fastest mode to run svaba
#137 opened May 7, 2024 by CHOWDHURY098
version number not updated？
#136 opened Mar 14, 2024 by gudeqing
Unexpected SV with a zero coordinate
#134 opened Feb 22, 2024 by gudeqing
1
True deletion discarded in final vcf
#133 opened Feb 5, 2024 by yiqijiang17
Genotype quality
#131 opened Dec 14, 2023 by MikeWLloyd
2
Compiling error for missing header files
#129 opened Oct 13, 2023 by lye2
4
recommended parameters when one chr has higher coverage than the others
#128 opened Sep 9, 2023 by EHC2019
1
The target SV in *.svaba.sv.vcf is not found in *.alignments.txt.gz
#127 opened Jul 31, 2023 by hhd1008611
4
Number of sequences in BAM header mismatches reference
#126 opened Jul 25, 2023 by tnnandi
5
Installation issue
#124 opened Jul 12, 2023 by tnnandi
10
"Caught stoi/stod/stof error" in breakpoints file
#123 opened Jun 23, 2023 by catalinamed
Is it possible to infer duplications/deletions/translocations/insertions/inversions from SvABA output?
#116 opened Jul 22, 2022 by Giuseppe1995
2
"Duplicate" kgID when doing annotation.
#115 opened Jun 23, 2022 by sxwcasd
2
Extraction of variant types
#111 opened Feb 23, 2022 by Danisov
Recommendation of QUAL?
#109 opened Dec 15, 2021 by greekkey
2
SV and indel size cutoff
#108 opened Oct 22, 2021 by tgong1
ERROR: Unable to open index file: ucsc.hg19.fa, yet it's in the current directory.
#107 opened Oct 15, 2021 by jamesdalg
2
Plan to adapt for the use of long reads?
#106 opened Sep 17, 2021 by ehjChun
Questions about *alignments.txt.gz
#105 opened Aug 17, 2021 by yifnzhao
Missing and incomplete output VCF headers
#104 opened Jul 14, 2021 by fgvieira
Very large memory usage
#103 opened Jul 13, 2021 by fgvieira
1
comparing svaba to snowman
#102 opened Jun 15, 2021 by anoronh4
How to speed up / debug deduplicating VCF step?
#101 opened Jun 4, 2021 by jbalberge
12
What does the GT(genotype) 0/0 means in final sv?
#100 opened May 26, 2021 by panguangze
Fastest way to run svaba
#99 opened Mar 12, 2021 by jsmedmar
1
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