GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language
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Updated
May 14, 2024 - Visual Basic .NET
GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language
ADTnorm normalizes the cell surface protein measurement of CITE-seq data, facilitating across batches and across studies data integration.
SNV calling from single cell sequencing
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA sequencing
An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
Non-parametric density inference for single-cell analysis.
scGEAToolbox: Matlab toolbox for single-cell gene expression analyses
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
Multi-omic single-cell optimal transport tools
MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
DANCE: a deep learning library and benchmark platform for single-cell analysis
R package to do the Ligand Receptor Analysis Visualization
marker-based purification of cell types from single-cell RNA-seq datasets
Interactive diffusion map for Single-Cell Data Analysis
Single-cell copy number calling and event history reconstruction.
Repository for Pachter Lab Biophysics
Diffusion model for gene regulatory network inference.
A python library for multi omics included bulk and single cell RNA-seq analysis.
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