Multi-source Translation

A collection of awesome things regarding all omics.

A python library for multi omics included bulk and single cell RNA-seq analysis.

Development repository for the Bioconductor package 'mixOmics '

Visual self-service analytics platform for big omics data.

From geospatial to spatial -omics

🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data

compositional data analysis toolbox

Picotti lab data analysis package.

Prize-Collecting Steiner Forests for Interactomes

Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis

Matrix dissimilarity from the differences of Moments and sparsity

Jigsaw-like AggMap: A Robust and Explainable Multi-Channel Omics Deep Learning Tool

An R package to plot interactive three-way differential expression analysis

OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.

R package for High dimensional data analysis and integration with O2PLS!

🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data

Open-Source Software for Omic Data Analysis and Visualization

Open-ST: profile and analyze tissue transcriptomes in 3D with high resolution in your lab

Muon for Julia