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single-cell-rna-sequencing

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RGC_Dnmt3a_pONC2d_paper

mcrewcow / RGC_Dnmt3a_pONC2d_paper

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Retinal ganglion cells regeneration in 2 days post optic nerve crush retina | Lydia Tai | Dong Feng Chen Lab collaboration | Schepens Eye Research Institute, Mass General Hospital, Harvard Medical School

python bioinformatics r sequencing velocity epigenetics rna transcriptome single-cell pathway-analysis gsea regeneration seurat rna-velocity single-nuclei-rna-sequencing single-nuclei cellchat single-cell-rna-sequencing retinal-ganglion-cell optic-nerve-crush
  • Updated Dec 5, 2023
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Harkany-Lab / Zupancic_2023

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This repository enables the reproducible analysis of an important developmental neuroscience dataset on hypothalamus neuron differentiation. It performs quality control, clustering, trajectory analysis, and identification of marker genes to characterize the differentiation trajectories of glutamatergic and GABAergic Onecut3+ neuronal subtypes.

transcription-factors cell-migration dopamine cytoskeleton trh single-cell-rna-sequencing glutamate thyrotropin-releasing-hormone hypothalamus-development neuronal-differentiation glutamatergic-neurons gabaergic-neurons onecut3 neuron-maturation neuritogenesis
  • Updated Aug 18, 2023
  • R

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