Reactome Pathway Analysis

📊 A universal enrichment tool for interpreting omics data

Visualization of Functional Enrichment Result

🩺 MeSH Enrichment and Semantic analyses

😷 Disease Ontology Semantic and Enrichment analysis

A set of Shiny apps to provide interactive enrichment analysis and exploration of results.

Python package to perform enrichment analysis from omics data.

🧬 gget enables efficient querying of genomic reference databases

HARE: Genetic Feature Enrichment Analysis Pipeline

Gene Set Enrichment Analysis in Python

Multi-Scale Target Explorer systematically identifies, prioritises, and visualises cell-type-specific gene therapy targets across the phenome.

In Press, GigaScience. Web app for post-GWAS/QTL analysis that performs a slew of novel bioinformatics analyses to cross-reference GWAS/QTL mapping results with a host of publicly available rice databases

Function Enrichment analysis and Network construction

Multi-omics analysis of LFQ proteomics and transcriptomics of an ALMS1 gene knockout cell model after TGF-B pathway stimulation.

Code, data and results associated with the "Rare diseases cell-typing" project.

mulea - an R package for enrichment analysis using various ontologies and empirical FDR correction

rbioapi: User-Friendly R Interface to Biologic Web Services' API

An R interface to enrichR

muleaData is an ExperimentHubData Bioconductor package for the mulea R package

LORA: Lipid Over-Representation Analysis