Issues: nf-core/differentialabundance
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Auto-format sample names
enhancement
New feature or request
#262
opened Apr 12, 2024 by
nick-youngblut
Failed to publish file => double forward slashes
bug
Something isn't working
#261
opened Apr 12, 2024 by
nick-youngblut
Error with samplesheet.csv with two column headers that have prefix in common
bug
Something isn't working
#249
opened Mar 12, 2024 by
aghr
Name of blocking variable not correctly recognized
bug
Something isn't working
#245
opened Feb 29, 2024 by
aghr
Dev version: On parameters website list parameter gene_sets_files in section GSEA
enhancement
New feature or request
#243
opened Feb 23, 2024 by
aghr
Mark --matrix as a required parameter in the parameter section on the diffabundance website
enhancement
New feature or request
#238
opened Feb 20, 2024 by
aghr
Differential expression at transcript level
enhancement
New feature or request
#235
opened Feb 19, 2024 by
fpsanz
Setting differential_subset_to_contrast_samples: true with output from nfcore rnaseq causes error
bug
Something isn't working
#234
opened Feb 16, 2024 by
aghr
RMARKDOWNNOTEBOOK - Error in \Something isn't working
cor()\
: ! supply both 'x' and 'y' or a matrix-like 'x'
bug
#230
opened Feb 2, 2024 by
tracelail
PLOT_EXPLORATORY module breaks with large number of samples.
bug
Something isn't working
#214
opened Dec 5, 2023 by
kai-lawsonmcdowall
Multiple variables/interactions
enhancement
New feature or request
#211
opened Dec 4, 2023 by
mtruglio
"exclude" samples aren't respected in SHINYNGS_STATICEXPLORATORY - Error in cor(matrices[[g]]) : supply both 'x' and 'y' or a matrix-like 'x'
bug
Something isn't working
#196
opened Nov 8, 2023 by
olgabot
Add log2_assays docu to nextflow_schema after shiny fix
enhancement
New feature or request
#153
opened Aug 24, 2023 by
WackerO
add apeglm log fold change shrinkage
enhancement
New feature or request
#152
opened Aug 18, 2023 by
bumproo
Differential splicing analysis using rMATS
enhancement
New feature or request
#115
opened Apr 21, 2023 by
dshechter
Reduce file size for report
enhancement
New feature or request
#106
opened Mar 29, 2023 by
pinin4fjords
Plot differentially expressed genes by Biotype
enhancement
New feature or request
#100
opened Mar 24, 2023 by
grst
Transcription factor and Pathway scoring using DoRothEA/PROGENy
enhancement
New feature or request
#99
opened Mar 24, 2023 by
grst
Add BioQC to identify tissue heterogeneity
enhancement
New feature or request
#98
opened Mar 24, 2023 by
grst
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