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Apr 4, 2017 - Shell
whole-genome-sequencing
Here are 100 public repositories matching this topic...
R tools to mine & craft somatic mutations from cancer genomes
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May 23, 2017 - R
R-package to analyse and quantify aberrations in DNA-sequencing data
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Jan 19, 2018 - R
AUIR: A high-throughput analysis pipeline for influenza sequence data
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Jan 22, 2018 - Python
WGS pipeline
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Jan 24, 2018 - Shell
Whole genome sequence analysis for donor-recipient pairs
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Apr 4, 2018 - R
a SGE, python, implementation of the ENCODE consortium whole genome bisulfite sequencing pipeline.
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Sep 28, 2018 - Python
Exploratory analysis for donor-recipient whole genome sequences
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Sep 30, 2018 - R
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Jan 24, 2019 - Python
Associate outliers with rare variation
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Apr 8, 2019 - Python
Bio Big Data and Precision Medicine Training Course
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Apr 26, 2019
Scripts used on a cluster that demonstrate vcf file manipulation and preparation.
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Mar 9, 2020 - Shell
Bacterial whole genome sequencing (WGS) analysis
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Mar 12, 2020 - Shell
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Jul 30, 2020 - R
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Jan 3, 2021 - Shell
A tool to find reads supporting/opposing structural variant breakpoints
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Feb 17, 2021 - Python
Predict mechanism underlying structural variants
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Feb 23, 2021 - Python
File manipulation/bioinformatics-type scripts that my colleagues have found useful in sequencing SARS-CoV2 (SC2).
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Apr 29, 2021 - Julia
In this repo, you will learn how WGS(whole genome sequencing) works in command line script pipeline.
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May 22, 2021 - Shell
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