vcf
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✂️ ⚡ Rapid haploid variant calling and core genome alignment
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Oct 18, 2023 - Perl
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
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Jul 7, 2023 - Python
cython + htslib == fast VCF and BCF processing
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Mar 1, 2024 - Cython
annotate a VCF with other VCFs/BEDs/tabixed files
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Nov 23, 2023 - Go
Bayesian genotyper for structural variants
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Mar 6, 2021 - Python
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
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Oct 12, 2023 - Python
Personal Cancer Genome Reporter (PCGR)
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May 10, 2024 - R
Structural variant toolkit for VCFs
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May 10, 2024 - Python
Toolset for SV simulation, comparison and filtering
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Dec 1, 2023 - C++
machine learning for genomic variants
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Apr 15, 2024 - JavaScript
Learning the Variant Call Format
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Mar 25, 2024 - Perl
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