Discussions

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  Using truvari to merge short variant calls with SVs

  JosephLalli started Mar 21, 2024 in Ideas

  

  

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  v4.2.1

  ACEnglish started Feb 6, 2024 in General

  

  

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  v4.2.0

  ACEnglish started Jan 13, 2024 in General

  

  

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  How does Truvari deal with translocations?

  Thomas-Rauter asked Sep 20, 2023 in Q&A · Closed · Unanswered

  

  

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  v4.1.0

  ACEnglish started Aug 7, 2023 in General

  

  

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  how did PctSeqSimilarity calculated?

  Calliiii asked Aug 1, 2023 in Q&A · Answered

  

  

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  Formatting dipcall vcf to use in truvari

  mchaisso started Jul 7, 2023 in General

  

  

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  Best way to annotate individual SV against merged SV set

  Phillip-a-richmond started Apr 20, 2023 in General

  

  

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  How can I get allele count, hom_alt count, from Truvari collapsed output?

  Phillip-a-richmond asked Apr 18, 2023 in Q&A · Answered

  

  

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  Truvari v4.0.0

  ACEnglish started Mar 13, 2023 in General

  

  

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  KeyError: 'invalid FORMAT: SR'

  flwascher asked Feb 17, 2023 in Q&A · Unanswered

  

  

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  How is variant type determined?

  shaze asked Feb 5, 2023 in Q&A · Answered

  

  

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  Collapsing DEL questions

  shaze asked Jan 31, 2023 in Q&A · Answered

  

  

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  Truvari v3.5.0

  ACEnglish started Aug 28, 2022 in General

  

  

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  Truvari v3.4.0

  ACEnglish started Jul 7, 2022 in General

  

  

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  Truvari v3.3.0

  ACEnglish started May 25, 2022 in General

  

  

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  Softening the boundaries of the bed file regions for matching variants

  bnoyvert started Feb 25, 2022 in Ideas

  

  

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  Understanding the HG002 truthset

  KasperH2 asked Apr 29, 2022 in Q&A · Answered

  

  

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  Truvari v3.1.2

  ACEnglish started Apr 1, 2022 in General

  

  

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  Dynamic Matching

  ACEnglish started Dec 21, 2021 in General

  

  

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  Truvari v3.1.0

  ACEnglish started Dec 22, 2021 in General

  

  

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  v3.1 - INS Reciprocal Overlap and New TruScore

  ACEnglish started Dec 21, 2021 in General

  

  

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  Truvari Metrics PairPlot

  ACEnglish started Dec 21, 2021 in vcf2df Recipes

  

  

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  Plotting a ROC curve

  ACEnglish started Oct 18, 2021 in vcf2df Recipes

  

  

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  Similarity of True Positives

  ACEnglish started Aug 29, 2021 in vcf2df Recipes

  

  

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