Machine learning for NeuroImaging in Python
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Updated
May 8, 2024 - Python
Machine learning for NeuroImaging in Python
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Brain Imaging Analysis Kit
Pycortex is a python-based toolkit for surface visualization of fMRI data
Official AFNI source and documentation
TE-dependent analysis of multi-echo fMRI
TAPAS - Translational Algorithms for Psychiatry-Advancing Science
Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.
Easy to use web database for statistical maps.
Graph theory analysis of brain MRI data
Python toolbox for analyzing imaging data
A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning
Automatic Analysis (aa)
fMRI Imaging Analysis
Julia module for reading/writing NIfTI MRI files
This is the repository for the BioImage Suite Web Project
A dynamic connectome mapping module in python.
A Python Toolbox for Multimode Neural Data Representation Analysis - A Representational Analysis Toolbox for Neuroscience, including Neural Pattern Similarity (NPS), Representational Similarity Analysis (RSA), Spatiotemporal Pattern Similarity (STPS) & Inter-Subject Correlation (ISC)
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.
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