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@canlab

Cognitive and Affective Neuroscience Laboratory

CANlab and friends: Analysis tools for neuroimaging and beyond

Welcome to the CANlab Organization GitHub. The most commonly used repositories are pinned below.

For a full list of repositories and what they contain, see here: [IN PROGRESS]

Pinned

  1. CanlabCore CanlabCore Public

    Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level…

    MATLAB 141 78

  2. MediationToolbox MediationToolbox Public

    Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mappi…

    HTML 73 28

  3. Neuroimaging_Pattern_Masks Neuroimaging_Pattern_Masks Public

    Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

    HTML 101 44

  4. Canlab_MKDA_MetaAnalysis Canlab_MKDA_MetaAnalysis Public

    Coordinate-based meta-analysis for neuroimaging using Multilevel Kernel Density Analysis and various other statistical tools (chi-square, clustering, correspondence analysis, parcellation)

    MATLAB 18 9

  5. CANlab_help_examples CANlab_help_examples Public

    How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.

    HTML 24 10

  6. RobustToolbox RobustToolbox Public

    Robust regression toolbox for neuroimaging data

    HTML 13 7

Repositories

Showing 10 of 64 repositories
  • WASABI_public Public

    Public repository for the Warmth, Anticipation, Sensation, Aversion, and Body-part Imaging Study (WASABI)

    Python 2 MIT 1 0 0 Updated Apr 26, 2024
  • CanlabCore Public

    Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

    MATLAB 141 78 29 2 Updated Apr 18, 2024
  • Neuroimaging_Pattern_Masks Public

    Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

    HTML 101 GPL-3.0 44 3 0 Updated Apr 14, 2024
  • HTML 9 5 0 0 Updated Apr 11, 2024
  • MediationToolbox Public

    Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mapping of mediation effects across the brain) and multivariate mediation.

    HTML 73 28 20 0 Updated Mar 14, 2024
  • HTML 2 MIT 0 0 7 Updated Feb 1, 2024
  • CANlab_help_examples Public

    How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.

    HTML 24 GPL-2.0 10 1 0 Updated Feb 1, 2024
  • Canlab_MKDA_MetaAnalysis Public

    Coordinate-based meta-analysis for neuroimaging using Multilevel Kernel Density Analysis and various other statistical tools (chi-square, clustering, correspondence analysis, parcellation)

    MATLAB 18 GPL-2.0 9 2 0 Updated Jan 25, 2024
  • MATLAB 0 1 0 0 Updated Dec 8, 2023
  • canlab_single_trials Public

    A repository and data interface for MVPA education and model/algorithm development

    MATLAB 2 GPL-3.0 1 0 0 Updated Dec 7, 2023