Graph theory analysis of brain MRI data

A dynamic connectome mapping module in python.

A performant, powerful query framework to search for network motifs

Python library for analysis of neuroanatomical data.

micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

STAGIN: Spatio-Temporal Attention Graph Isomorphism Network

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.

Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation

A unified framework for skeletonization, morphological analysis, and connectivity analysis.

A Hugo theme with backlinks for online communities

Please use the new version of LiFE: www.github.com/brain-life/encode

A prediction-based extension of network-based statistics.

Simulate the C. Elegans worm brain in your browser and interact with the worm as it moves around

Fast and memory efficient approach for connectome-wide association studies in R and C++. Uses custom implementation of multivariate distance matrix regression to associate brain and behavior.

A multipurpose matlab-based MEG/EEG overlay & network plotter

GNN with summarization/grouping layer for speed and interpretability

Efficient meta learning of synaptic plasticity from experimental data using artificial neural network models

Tools to work with the FlyWire connectome. Fully interoperable with navis.

An Explainable Geometric-Weighted Graph Attention Network (xGW-GAT) for Identifying Functional Networks Associated with Gait Impairment

Code for implementing the Aggregation-Network diffusion model (AND), as described in the paper: "Combined Model of Aggregation And Network Diffusion Recapitulates Alzheimer’s Regional Tau-PET " by Ashish Raj*, Veronica Tora, Xiao Gao, Hanna Cho, Jae Yong Choi, Young Hoon Ryu, Chul Hyoung Lyoo, Bruno Franchi. *Department of Radiology and Biomedic…