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388 Open 2,508 Closed
388 Open 2,508 Closed
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Issues list

Get rid of permission 777 directories
#4922 opened May 9, 2024 by adamnovak
Document when WDL workflows copy or mount files
#4921 opened May 7, 2024 by unito-bot
Spike: Determine work necessary to get rid of Docker in Docker
#4915 opened May 3, 2024 by stxue1
2
toil stats should output a comma separated table with one row per task
#4913 opened May 3, 2024 by juklucas
Server-style Toil tutorial
#4911 opened May 2, 2024 by unito-bot
Do not write to /tmp when --tmpdir-prefix is set
#4910 opened May 2, 2024 by arunisaac
2
Figure out a way to run WDL and CWL runners without nondefault Docker privileges
#4907 opened May 1, 2024 by stxue1
Add plugin system for job stores
#4904 opened Apr 30, 2024 by unito-bot
Add Python 3.12 Support
#4903 opened Apr 30, 2024 by unito-bot
1
Make TES plugin work on some particular released version of Toil
#4899 opened Apr 29, 2024 by unito-bot
1
Spike: Review CLI and possible improvements
#4898 opened Apr 29, 2024 by unito-bot
@DailyDreaming
Get support from the WDL community concerning testing and spec conformance. wdl
#4897 opened Apr 29, 2024 by unito-bot
Add supported language versions to README
#4896 opened Apr 29, 2024 by unito-bot
1
@adamnovak
Make the Toil web site talk about WDL
#4895 opened Apr 29, 2024 by unito-bot
@DailyDreaming
Write a tutorial around an example of a failure that toil debug-job actually helps you fix documentation
#4894 opened Apr 29, 2024 by adamnovak
@adamnovak
Implement *real* per-node cleanup for Slurm specifically
#4882 opened Apr 25, 2024 by adamnovak
Document Toil plugins documentation
#4880 opened Apr 25, 2024 by unito-bot
Test Toil plugin support
#4879 opened Apr 25, 2024 by unito-bot
Coordination directory moves with the work directory when that's not advisable bug
#4877 opened Apr 24, 2024 by adamnovak
1
@adamnovak
Lock file manipulation can stop the workflow if a transient generic "Input/output error" is ever encountered
#4874 opened Apr 19, 2024 by adamnovak
1
@adamnovak
Make WDL notice when a file can no longer be used and delete it wdl
#4872 opened Apr 17, 2024 by unito-bot
Accessing large files from public buckets scares the users
#4867 opened Apr 10, 2024 by adamnovak
@adamnovak
Slurm does not implement --maxCores, --maxMemory, and --maxDisk correctly
#4863 opened Apr 8, 2024 by adamnovak
Evangelize WDL conformance tests
#4858 opened Apr 2, 2024 by unito-bot
3
Add an option to mount WDL inputs as a fully realized directory of files to allow unlimited input files to Singularity containers wdl
#4857 opened Apr 2, 2024 by adamnovak
ProTip! What’s not been updated in a month: updated:<2024-04-14.