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37 Open 486 Closed
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Issues list

Different geneset names on playdata / pgx file bug Something isn't working
#938 opened May 9, 2024 by ESCRI11
1
@ESCRI11
Genesets > Geneset expression, volcano plot does not work when no gene is selected in table bug Something isn't working
#933 opened May 8, 2024 by ESCRI11
1
@ESCRI11
xbioc is guessing probetype to GENEBANK instead of UNIPROT bug Something isn't working high priority high priority issues
#930 opened May 6, 2024 by mauromiguelm
@ivokwee
playbase::guess_organism cannot distinguish between rat and mouse bug Something isn't working high priority high priority issues
#929 opened May 6, 2024 by mauromiguelm
1
@mauromiguelm @zitoa
3
New feature request: colour patterns in the Volcano plots enhancement New feature or request
#928 opened Apr 29, 2024 by AxelBigOmics
3
@ESCRI11
old/new upload: empty column in counts crashes comtrast builder and OPG bug Something isn't working high priority high priority issues
#923 opened Apr 22, 2024 by mauromiguelm
1
@mauromiguelm
biomaRt connection issues crashes dataset computation for non-human species bug Something isn't working
#919 opened Apr 18, 2024 by mauromiguelm
1
@mauromiguelm
Prevent new upload to overwrite pgx bug Something isn't working
#918 opened Apr 17, 2024 by mauromiguelm
1
@mauromiguelm
Force user to take action when comparison data is incorrect enhancement New feature or request
#916 opened Apr 12, 2024 by mauromiguelm
1
@mauromiguelm
Upload Contrast: Handling numerical sample phenotypes enhancement New feature or request
#913 opened Apr 11, 2024 by mauromiguelm
1
Upload of sample with numerical phenotypes bug Something isn't working high priority high priority issues
#912 opened Apr 11, 2024 by mauromiguelm
@mauromiguelm
contrast builder dos not reset contrasts groups when "add contrast" is clicked bug Something isn't working UX Everything related to the user experience
#904 opened Mar 27, 2024 by mauromiguelm
1
@mauromiguelm
Cell profiling "N must be at least 2" error on Koen's dataset
#900 opened Mar 21, 2024 by ivokwee
Compare datasets > Fold change > Highlight genes > Custom: Genes from custom GMT do not appear in results bug Something isn't working
#898 opened Mar 21, 2024 by mauromiguelm
dataview > sample information: add option for phenotype correlation asn enhancement New feature or request
#883 opened Mar 1, 2024 by mauromiguelm
@zitoa
3
biomarker module is slow with large number of samples (>1000) enhancement New feature or request
#843 opened Jan 17, 2024 by mauromiguelm
pathway modules: add table of genes by geneset enhancement New feature or request
#842 opened Jan 17, 2024 by mauromiguelm
@mauromiguelm
remove reference to database that is not used cleanup documentation good first issue
#831 opened Dec 22, 2023 by mauromiguelm
UX suggestion for Compare datasets function enhancement New feature or request UI Everything that has to do with the UI of the app
#796 opened Dec 7, 2023 by Kstead
1
Problem with "Similar experiments" module and database size
#792 opened Dec 7, 2023 by AxelBigOmics
1
add usage count for subtabs in module enhancement New feature or request
#658 opened Aug 30, 2023 by ivokwee
@ivokwee
Pgx check for valid feature names bug Something isn't working
#652 opened Aug 29, 2023 by mauromiguelm
2
Volcano plots improvement evolving
#638 opened Aug 22, 2023 by mauromiguelm
@mauromiguelm
1
Download each plot in grid separately enhancement New feature or request
#627 opened Aug 15, 2023 by mauromiguelm
@ESCRI11
2
Add statistics to clustering annotation in clustering modules
#623 opened Aug 10, 2023 by mauromiguelm
2
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