Genomic data manipulation tool
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Updated
Jun 4, 2024 - Python
Genomic data manipulation tool
🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
Temporal Integrative Genomics Analysis in R
plant microarray analysis
Python library to access Gene Expression Omnibus Database (GEO)
A simple program to generate .vcf and plink format files from .idat files
Latex scripts to compile my PhD thesis
🔬 R package: Analysis of Large Affymetrix Microarray Data Sets
A Snakemake workflow to analyse Illumina methylation arrays
read Affymetrix .CEL files
An R package for utilities to guide in-depth detection of circadian signals from omics time series data
extract experimental metadata from GEO xml files
Nextflow pipeline for microarray and RNA-seq
Differential Gene Expression (DGE) Analysis in Curated Microarray Data of Breast Cancer Subtypes
Simple to use package for OMICS data analysis (featuring limma, WGCNA, GSEA)
Collection of gene expression datasets
SAGA: Simulated annealing aided genetic algorithm for gene selection from microarray data
Differential Expression Analysis Pipeline
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