Simulation of elastic scattering in electron microscopy using the multislice algorithm. Simulations include various STEM and TEM techniques such as ADFSTEM, BFSTEM, ABFSTEM and CoM.
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Updated
Apr 18, 2023 - C++
Simulation of elastic scattering in electron microscopy using the multislice algorithm. Simulations include various STEM and TEM techniques such as ADFSTEM, BFSTEM, ABFSTEM and CoM.
Image acquisition software for mesoSPIM light-sheet microscopes.
A small Windows image editor featuring cropping, markup, and filtering. This was made using PIL and tkinter in python.
A PixInsight Script that facilitates mixing or transferring elements from two images into a single image. Several different mixing equations are offered. One use for a couple of the equations is to transfer stars from an RGB image into a narrowband image.
Generates real-time color video from a monochrome camera and sequential LED illumination system.
MARISSA - Magnetic Resonance Imaging Software for Standardization
For better understanding of far-field diffraction patterns obtained in coherent X-ray diffraction I wrote a simple stand-alone application for laptops with built-in web cams. It allows to see coherent effects from different systems, which can be simply exposed to the web camera being drawn on the paper. There is a number of similar applications …
High-performance image manipulation for web servers. Includes imageflow_server, imageflow_tool, and libimageflow
Tutorial preprocessing MSI using MALDIquant
Code for multi-channel tomographic reconstruction with Multi-Channel DART (MC-DART)
A Nextflow wrapper for HistoQC
Quantitative Imaging Profile (QIPr) web application
Scripts for extraction and analysis of widefield calcium data from awake behaving mice.
Software in support of Gravimeters able to detect the vector tidal acceleration of the sun and moon
Software for controlling the temperature of a self-heating AFM cantilever
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