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Popular repositories

  1. pupil-analysis pupil-analysis Public

    Measure pupil diameter from frames in a series of tiff stacks.

    MATLAB 1 1

  2. open-field-analysis open-field-analysis Public

    Scripts to segment and track rodents in an open field.

    MATLAB 1

  3. transgenic-pupil transgenic-pupil Public

    A method for segmentation and measurement of mouse pupil from video sequences.

    MATLAB 1 1

  4. GC6-wf GC6-wf Public

    Scripts for extraction and analysis of widefield calcium data from awake behaving mice.

    MATLAB

  5. ex-vivo ex-vivo Public

    A repository of various scripts to read and analyze ex vivo whole cell recording data.

    MATLAB

  6. prominence-plots prominence-plots Public

    Scripts to create prominence plots from widefield calcium imaging data. Steinmetz et al., 2017 eneuro

    MATLAB