Expression of Wnt signaling components in the brachiopod Terebratalia transversa
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May 17, 2024 - HTML
#
gene-expression
Here are 389 public repositories matching this topic...
This project provides the classification of DNA sequences for Breast cancer prediction which into promoter regions associated. Using machine learning and deep learning techniques, I analyze and try to predict sequence data for negative and positive answers in cancer prediction.
bioinformatics
neural-network
optimization
svm
gene-expression
breast-cancer-prediction
k-nearest-neighbours
dna-sequences
bioinformatics-analysis
breast-cancer
bioinformatics-tool
cancer-prediction
dna-classification
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May 17, 2024 - Jupyter Notebook
Single cell Nanopore sequencing data for Genotype and Phenotype
gene-expression
single-cell
isoforms
demultiplexing
cell-barcode
rna-seq-pipeline
single-nucleotide-variation
long-read-sequencing
nanopore-analysis-pipeline
umi-curation
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May 16, 2024 - Python
A powerful abstraction of gene databases
bioinformatics
gene-expression
gene-regulation
gene-ontology
drug-discovery
genes
bioinformatics-tool
drug-target-interactions
gene-enrichment
gene-relationships
gene-databases
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Updated
May 16, 2024 - Python
Enables Gene Ontology (and other feature annotation) enrichment calculations and comparisons between feature sets.
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May 10, 2024 - R
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
bash
bioinformatics
rna-seq
genomics
ngs
gene-expression
bioinformatics-pipeline
alignment
star
quantification
transcriptomics
illumina
rsem
ngs-analysis
fastqc
spliced-alignment
stringtie
splice-aware
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May 9, 2024 - Python
⏳ Online graphical interface to explore age-related gene expression alterations in 49 GTEx human tissues
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May 8, 2024 - HTML
NicheNet: predict active ligand-target links between interacting cells
rna-seq
gene-expression
network-inference
data-integration
single-cell-rna-seq
single-cell-omics
intercellular-communication
ligand-receptor
ligand-target
cell-cell-communication
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May 3, 2024 - R
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
visualization
gui
shiny
clustering
gene-expression
feature-extraction
transcriptomics
single-cell
hacktoberfest
dimension-reduction
human-cell-atlas
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May 2, 2024 - R
Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
gui
r
shiny
reproducible-research
gene-expression
data-visualization
bioconductor
transcriptome
user-friendly
data-exploration
transcriptomics
rna-seq-analysis
pathway-analysis
rna-seq-data
bioconductor-package
functional-enrichment-analysis
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May 2, 2024 - R
Co-expression networks for gene correlation analysis.
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Apr 29, 2024 - R
Fast Inference of Biological Networks from Directed Regulations (Findr) in Julia
bioinformatics
genomics
julia
computational-biology
gene-expression
gene-network-inference
statistical-genetics
causal-inference
gene-network
biojulia
multi-omics
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Apr 27, 2024 - Julia
Python3 binding to mRMR Feature Selection algorithm (currently not maintained)
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May 6, 2024 - C++
😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
bioinformatics
gene-expression
data-visualization
awesome-list
data-exploration
atlas
rna-seq-data
gene-expression-profiles
expression-browser
humancellatlas
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Apr 26, 2024
Uncovering structure in unsupervised single cell analysis.
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Apr 25, 2024 - Jupyter Notebook
A workflow based on QTLtools to run cis- and trans-QTL analyses.
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Apr 22, 2024 - Shell
An open platform which provides information about miRNAs and genes from different popular databases
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Apr 18, 2024 - Python
This repository is the current repository for our Jones et al. 2024 manuscript titled Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage.
neuroscience
gene-expression
rnaseq
alternative-splicing
nanopore-sequencing
long-read-sequencing
isoform-diversity
genomics-analysis
sex-differences
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Apr 17, 2024 - R
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