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25 Open 46 Closed
25 Open 46 Closed
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Issues list

Please check if appropriate organism/ID type was provided! Allowed proportion (0.98) of missing resource elements exceeded (1.00).
#105 opened Apr 25, 2024 by soniyalama
3
Sanity check if liana uses the log normalised values enhancement New feature or request
#104 opened Apr 24, 2024 by ahmetrifaioglu
@dbdimitrov
1
AnnData dtype argument deprecation enhancement New feature or request
#103 opened Apr 19, 2024 by dbdimitrov
@dbdimitrov
Clarify LIANA + MOFA vignette enhancement New feature or request
#102 opened Apr 17, 2024 by dbdimitrov
@dbdimitrov
2
MOFA talk with multiple samples bug Something isn't working help wanted Extra attention is needed
#101 opened Apr 15, 2024 by nicolebussola
@dbdimitrov
1
Add a tutorial on GPU-accelerated misty enhancement New feature or request
#100 opened Apr 12, 2024 by dbdimitrov
@dbdimitrov
Export Elbow plot from nmf enhancement New feature or request
#99 opened Apr 12, 2024 by dbdimitrov
@dbdimitrov
ValueError: Please check if appropriate organism/ID type was provided! bug Something isn't working help wanted Extra attention is needed
#97 opened Apr 8, 2024 by anke-king
@dbdimitrov
3
Liana on pseduo bulk-sc data data help wanted Extra attention is needed
#96 opened Mar 28, 2024 by Marwansha
@dbdimitrov
6
Flow chart to guide standard LIANA+ workflows enhancement New feature or request
#94 opened Mar 25, 2024 by dbdimitrov
@dbdimitrov
ZeroDivisionError: float division by zero help wanted Extra attention is needed
#93 opened Mar 25, 2024 by anke-king
@dbdimitrov
8
Move Vignettes to Another Repo documentation Improvements or additions to documentation enhancement New feature or request
#90 opened Feb 21, 2024 by dbdimitrov
@dbdimitrov
Update MOFAcell Tutorial enhancement New feature or request
#86 opened Feb 8, 2024 by dbdimitrov
3 tasks
@dbdimitrov
Frequency Chord diagram and Heatmap in Python enhancement New feature or request
#85 opened Jan 31, 2024 by maximelepetit
@dbdimitrov
7
move LIANA+ plots to matplotlib and seaborn? [User Opinons Welcome] enhancement New feature or request
#83 opened Jan 26, 2024 by dbdimitrov
@dbdimitrov
5
Implement GPU to speed up the CCC caculation in process of rank_aggregate method (CellChat part)? enhancement New feature or request
#78 opened Dec 19, 2023 by xflicsu
@dbdimitrov
1
The mouse resource are missing important interactions that should be possible to convert bug Something isn't working help wanted Extra attention is needed
#76 opened Nov 29, 2023 by johan-gson
@dbdimitrov
2
Should we exclude CellTalkDB from curated resources list? enhancement New feature or request question Further information is requested
#75 opened Nov 28, 2023 by dbdimitrov
@dbdimitrov
4
Additional metadata in results dataframe enhancement New feature or request
#70 opened Nov 8, 2023 by dnjst
@dbdimitrov
2
Help understanding causal network output help wanted Extra attention is needed
#66 opened Oct 17, 2023 by ebasto
1
Cellphone DB (and other database versions) enhancement New feature or request
#60 opened Sep 22, 2023 by SimonDMurray
2
Add aggregate function for MISTy models (extend plots) enhancement New feature or request
#56 opened Sep 7, 2023 by PauBadiaM
@dbdimitrov
3
Single-cell Multi-omics tutorial enhancement New feature or request
#41 opened Jul 27, 2023 by dbdimitrov
@dbdimitrov @schae211
Set scanpy as a "common" dependency
#40 opened Jul 27, 2023 by dbdimitrov
@dbdimitrov
Querying Pypath & BioCypher knowledge graph enhancement New feature or request
#9 opened Feb 8, 2023 by dbdimitrov
@slobentanzer @dbdimitrov
1
ProTip! Updated in the last three days: updated:>2024-04-25.