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VCF visualization interface
HTML 144 43
Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
Python 43 17
Forked from nf-core/raredisease
CG's rare disease pipeline in next flow, see the main repo here 👇
Nextflow 5 1
Mutation Identification Pipeline. Read the latest documentation:
Perl 39 10
Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.
Python 2 3
Microbial Utility Toolbox And wrapper for data traNsmission and Transformation
Python 1
Glue between Clinical Genomics apps
Chanjo provides a better way to analyze coverage data in clinical sequencing.
Communication layer between CG and the pipelines.
Keep track of and manage analyses
Report generator for Chanjo output
Rewrite of genotype package
Compress fastq files with spring and check the integrity
An open source recipe book from the awesome staff of Clinical Genomics
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