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Pull requests: Clinical-Genomics/BALSAMIC

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Pull requests list

feat: use UMIs in TGA workflow
#1434 opened May 17, 2024 by mathiasbio • Draft
16 of 52 tasks
1
chore: Update development versions & GitHub Actions
#1433 opened May 13, 2024 by ivadym Loading…
25 of 53 tasks
@ivadym
4
feat: Remove GATK3
#1432 opened May 8, 2024 by khurrammaqbool Loading…
22 of 52 tasks
Release 15
1
@khurrammaqbool
8
feat: replace vardict with tnscope
#1429 opened Apr 15, 2024 by mathiasbio • Draft
16 of 52 tasks
1
1
placeholder PR 2,1,1 umi
#1419 opened Mar 14, 2024 by mathiasbio • Draft
16 of 52 tasks
2
feat: update sentieon to version 202308.02
#1413 opened Mar 7, 2024 by mathiasbio • Draft
16 of 53 tasks
2
add soft normal-filtered VCF
#1402 opened Feb 27, 2024 by mathiasbio • Draft
16 of 52 tasks
1
feat: deduplicate with UMIs
#1358 opened Jan 16, 2024 by mathiasbio • Draft
1 of 5 tasks
1
3
feat: change samtools stats to run per lane
#1349 opened Jan 3, 2024 by mathiasbio • Draft
3 tasks
1
Add resort bam
#1331 opened Nov 21, 2023 by mathiasbio • Draft
3 tasks
2
fix: make cadd snv optional
#1304 opened Oct 30, 2023 by mathiasbio • Draft
3 tasks
5
fix: TGA optical dup detection
#1292 opened Oct 20, 2023 by mathiasbio • Draft
3 tasks
1
@mathiasbio
3
ProTip! What’s not been updated in a month: updated:<2024-04-27.