vcf
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VarFish: comprehensive DNA variant analysis for diagnostics and research
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May 10, 2024 - Python
Efficient variant-call data storage and retrieval library using the TileDB storage library.
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May 11, 2024 - C++
vcfpp.h + htslib + Rcpp = fast VCF/BCF https://doi.org/10.1093/bioinformatics/btae049
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May 10, 2024 - C
Structural variant toolkit for VCFs
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May 10, 2024 - Python
PopGenHelpR is an R package that estimates commonly used population genomic statistics and generates publication quality figures.
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May 9, 2024 - R
Genome browser and variant annotation
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May 10, 2024 - C++
Variant translation library for Clojure
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May 9, 2024 - Clojure
vcfdist: Accurately benchmarking phased variant calls
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May 8, 2024 - C++
GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.
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May 8, 2024 - Java
Highly Open Workflow for Annotation & Ranking toward genomic variant Discovery. HOWARD annotates and prioritizes genetic variations, calculates and normalizes annotations, translates files in multiple formats (e.g. vcf, tsv, parquet) and generates variants statistics.
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May 8, 2024 - Python
A port of biocommons/hgvs to the Rust programming language
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May 8, 2024 - Rust
Genome annotation based on Rust and RocksDB
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May 11, 2024 - Rust
Application of pan-genome for population
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May 8, 2024 - Perl
A Desktop Application made by Tkinter for making vcf contact files.
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May 7, 2024 - Python
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