DupFinder: A tools to detect the duplicated genes using Illumina and Nanopore sequencing data

Microbial fitness inference from barcode counts.

Environment to practice Bioinformatics

Analyze Whole Genome Bi-Sulfite Sequencing for Grape evolution in response to grafting

My Key Story presentation for Auckland Research Bazaar 2020

The purpose of optimization is to achieve the “best” design relative to a set of prioritized criteria or constraints. These include maximizing factors such as productivity, strength, reliability, longevity, efficiency, and utilization. This decision-making process is known as optimization. This repository discusses some of the matchematical tech…

Documents and scripts for analysis of oligonucleotide synthesis errors.

Build Docker container for RseQC and (optionally) convert to Apptainer/Singularity.

Build Docker container for Picard Tools and (optionally) convert to Apptainer/Singularity.

🧬 Python utilities for working with nucleotide sequence strings.

Alignment of nanopore reads

R-package to analyse data from the immuno-detection by sequencing (ID-seq) technology.

Base librarys for sequencing data analysis.

Convenient handling of FASTA-encoded files for the Go language

Data portal and API for Center for Viral Systems Biology (CViSB) data

cross-contamination of plant virus base on read assignation

R functions for querying Sean Davis' omicidx system

Password generator using Python based on the principles of ASCII and concepts of sequencing.

Human Whole Exome Sequencing