ld-tools: toolkit for linkage disequilibrium calculation designed to work locally

Progetto di Elementi di Bioinformatica, A.A. 2021/2022

Small program to mask positions that are likely to result in PMD artifact from a BAM file using a predefined SNP catalog

Pysam module (python2.7) singularity container

Various scripts for working with NGS data in file formats such as VCF, BAM/SAM, and JSON

Investigating unmapped reads within next generation sequencing data will provide additional information regarding the source of the trace microbial reads.

Bioinformatics CLI tool to generate WIG tracks from SAM/BAM files

vue app with flask REST api to process genomic data

Per-position and summary statistics for BAM files