plasmid
Here are 32 public repositories matching this topic...
Pathogen whole genome sequence (WGS) data analysis pipeline
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May 2, 2024 - Nextflow
A simple python plasmid map creator
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Apr 28, 2024 - Python
DEPRECATED: Use Cenote-Taker 3 instead
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Jan 19, 2024 - Shell
A collection of bioinformatics tools for use with galaxy written at Quadram Institute
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Dec 22, 2023 - HTML
code repo for mobileOG-db
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Nov 7, 2023 - Python
A tool to batch-generate optimal DNA primers for Sanger sequencing. Output .xlsx file is directly compatible with IDT Oligo Entry.
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Oct 18, 2023 - Python
A method for next-day high-throughput full plasmid sequencing from colonies
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Jun 15, 2023 - Python
A random forest classifier to identify contigs of plasmid origin in contig and scaffold genomes
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Apr 20, 2023 - Python
An accurate and sensitive bacterial plasmid identification tool based on deep machine-learning of shared k-mers and genomic features.
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Apr 20, 2023 - Perl
repository-based plasmid design
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Nov 28, 2022 - Go
Finding regions of similarity between plasmids
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Nov 2, 2022 - Nextflow
Plasmid Designer and DNA Editor
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Aug 19, 2022 - TypeScript
Converts gbk addgene plasmids to JSON form.
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Aug 21, 2021 - Go
PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.
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Jul 23, 2021 - Shell
Software for prediction of plasmid sequences in metagenomic assemblies
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Jun 28, 2021 - Python
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