Official git repository for Biopython (originally converted from CVS)
Protein Graph Library
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Official release of the ProGen models
A collection of awesome things regarding all omics.
Diffusion models of protein structure; trigonometry and attention are all you need!
A dependency-free cross-platform swiss army knife for PDB files.
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.
Ribbon diagrams of proteins in #golang.
Evolutionary couplings from protein and RNA sequence alignments
Saprot: Protein Language Model with Structural Alphabet
[ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models
A collection of research papers for AI-based protein design
Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.
Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)
web-based protein structure viewer and analysis tool interactively or in batch mode
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