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phage-host-prediction

Here are 3 public repositories matching this topic...

bioinfodlsu / phage-host-prediction

Published in PLOS ONE. Phage-host interaction prediction tool that uses protein language models to represent the receptor-binding proteins of phages. It presents improvements over using handcrafted sequence properties and eliminates the need to manually extract and select features from phage sequences

machine-learning bioinformatics genomics transformer protein proteomics transfer-learning representation-learning protein-embedding phage-host-prediction protein-language-model

Updated May 20, 2024
Jupyter Notebook

MGXlab / phap

A snakemake workflow wrapping various phage host prediction tools

bioinformatics-pipeline phage-host-prediction

Updated Mar 7, 2022
Python

raghavagps / phagetb

A multi-level prediction of interaction between bacteriophages and pathogenic bacterial hosts

bioinformatics phage-host-prediction bacterial-infections bacterophage antibacterial-virus

Updated Aug 26, 2023
Python

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