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@MGXlab

VEO & MGX Groups

Viral Ecology and Omics Group (VEO) & Metagenomics Group (MGX)

Popular repositories

  1. CAT_pack CAT_pack Public

    CAT/BAT/RAT: tools for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) and for taxonomic profiling of metagenomes

    Python 164 32

  2. DNNGIOR DNNGIOR Public

    Scripts to build high-quality genome-scale metabolic model by using a deep neural network to guide gapfilling

    Python 10 3

  3. Viromics-Workshop-MGX Viromics-Workshop-MGX Public

    Python 8 1

  4. social_niche_breadth_SNB social_niche_breadth_SNB Public

    Calculate the Social Niche Breadth (SNB) score of all taxonomic lineages in a set of microbiomes.

    Python 8 1

  5. CAT_dev CAT_dev Public

    CAT/BAT/RAT: tools for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) and for taxonomic profiling of metagenomes

    Python 5

  6. pvogs_function pvogs_function Public

    A proof-of-concept, automated and reproducible pipeline for predicting functional associations between pVOGs.

    Python 2

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