Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
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Updated
Jun 24, 2023 - Scala
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Python scripts for searching Pubmed using Biopython and working with eponymous terms
Tools for querying bioinformatics web resources
🌠 Easily download genomes and build BLAST/Bowtie indexes in Python
The focus of this project is to develop a machine learning algorithm using the plasma lipid data provided to provide staging for a patient’s liver disease diagnosis.
Python interface to NCBI Eutils
Biomedical Plant Disease Gold Standard Corpus Dataset For Relation Extraction From NCBI
Analysis of the origin of SARS-COV 2, how could this pandemic have started?
Using HTML, CSS, JS, PHP and USBServer to build a biological server that provides many biological utilities.
GCModeller base core assembly library on common biological database read and write I/O
This is a Kaggle competition sponsored by Memorial Sloan Kettering Cancer Center. This competition is the first step in personalized medicine to determine oncogenicity of a tumor. Algorithm using sparse words to predict gene mutations effect on protein function.
A framework for keeping biomedical text mining result up-to-date
Crawls the ATGC sequence of the sars covid2 novel coronavirus from ncbi website.
Python script to easily get genes in both fasta and genebank formats and download articles from pubmed
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