Implementation of "Basic Local Alignment Search Tool" in Hadoop for DNA analysis
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Updated
Sep 16, 2018 - Java
Implementation of "Basic Local Alignment Search Tool" in Hadoop for DNA analysis
Supporting material for MMG 801 Lectures 3–5 on 'Phylogeny and Comparative Genomics'
The official Seqs-Extractor Repository
Repo for course 4 bioinformatics
Retrieves matrix with number of gene/protein hits per query in the blast result. Takes blast tabular file as input.
Bioinformatics Data Structures & Algorithms [such as the Q-Gram Index, scoring alignments , rna-structure prediction, generating the BLAST-Ńeighborhood and more.]
An improved method for predicting binders of HLA-DRB1-04:01
Sequence similarity searches (e.g. BLAST) made easy
Tool for analysing BLAST output for ncRNA sequences
A PHP wrapper for NCBI BLAST URL API
genomic alignment similarity search tool
Seamless Integration of BLAST Sequence Searches in R
MView extracts and reformats the results of a sequence database search or multiple alignment.
Microsoft Azure HPC & Big Compute
Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
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