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NanoString Technologies
- The Netherlands
- https://linktr.ee/paula.ramos_silva
- https://www.linkedin.com/paula-ramos-silva/
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ProcessCount
ProcessCount PublicPrints total gene presences, multi, gains, losses, expansions, contractions per branch/node in the phylogenetic tree resulting from the Count software
Python 2
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run-multi-InterProScan
run-multi-InterProScan PublicRuns multiple protein sequences in InterProScan remotely
Python 1
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snakemake_transcriptome_workflow
snakemake_transcriptome_workflow PublicWorkflow for de novo transcriptome assemblies from paired-end illumina reads, annotation and quality checks
CAP CDS 1
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naturalis-server-docs
naturalis-server-docs PublicDocumentation resources for the server of the Marine Evolution & Ecology group
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Comparative_DGE_Enrichment
Comparative_DGE_Enrichment PublicR scripts and input data for RNAseq differential gene expression without a reference genome from Ramos-Silva, Odendaal et al. 2022
HTML
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CountBlastHits
CountBlastHits PublicRetrieves matrix with number of gene/protein hits per query in the blast result. Takes blast tabular file as input.
Python
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