Tools to analyse allele-specific methylation using bisulfite sequencing data
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Updated
Dec 20, 2017 - Java
Tools to analyse allele-specific methylation using bisulfite sequencing data
bisulfite sequencing pattern analysis tool
a SGE, python, implementation of the ENCODE consortium whole genome bisulfite sequencing pipeline.
Lecture given in University of Pittsburgh course Genomics (BIOSC 1250) related to the epigenetic-basis for PTSD, how methylation of cytosines is detected and how epigenetic modifications of PTSD are hereditary.
Targeted Amplicon Bisulfite Sequencing Analysis Tool
Bisulfite-seq data Workflow Automation Software and Protocols
A Bioconductor ExperimentHub data package for flow sorted purified whole blood cell types measured using DNA methylation on WGBS platform from BLUEPRINT
Bisulfite Sequencing Virus integration Finder
Suite of tools to conduct methylation data analysis. Methods from this workspace can be used for alignment and quality control analysis for various protocols including Whole Genom Bisulfite Sequencing (WGBS), Reduced Representation Bisulfite Sequencing (RRBS) and Hybrid Selection Bisulfite Sequencing (HSBS).
Analyze Whole Genome Bi-Sulfite Sequencing for Grape evolution in response to grafting
Differential methylation: Easy, Fast, Identification and ANnoTation
A simple python script to find the amount of methylation after bisulfites sequencing from .fasta files
bicycle (bisulfite-based methylcytosine caller) is a next-generation sequencing bioinformatics pipeline able to perform a full DNA methylation level analysis
Pipeline for BS-Seq data based on snakemake
BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool
Snakemake workflow for the processing of EMseq data
A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.
Arioc: GPU-accelerated DNA short-read alignment
A Nextflow pipeline to align and quantify Methylation (Bisulfite) sequencing data.
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