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Oct 10, 2017 - MATLAB
biological-networks
Here are 58 public repositories matching this topic...
The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
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Apr 23, 2024 - Jupyter Notebook
A web resource to analyze bi-partite and non-bipartite biological networks.
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Dec 22, 2022 - JavaScript
Translation between CellDesigner-flavoured SBML and SBGN-ML
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Nov 17, 2018 - Java
R Package: Steiner tree approach for graph analysis
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May 26, 2023 - R
Evolution of protein interactomes across the tree of life
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Sep 30, 2019 - C++
OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.
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Jan 11, 2024 - HTML
MGN-Net: A novel Graph Neural Network for integrating heterogenous graph population derived from multiple sources.
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Jun 6, 2022 - Python
Explore biomolecular pathways in Reactome from the command-line or a Python script
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Nov 19, 2023 - Python
Molecular interactions inference from single-cell multi-omics data
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Apr 23, 2024 - Python
A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input gene list.
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May 8, 2024 - Python
Mutual Interactors: A graph-based machine learning model with applications in molecular phenotype prediction
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Nov 26, 2023 - Jupyter Notebook
Finding paths of interest in networks
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May 14, 2022 - Go
Enhancing Boolean networks with continuous logical operators and edge tuning: smoothing simulations
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Apr 5, 2019 - R
neuroML models for reconstructed inferior olivary cells.
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Dec 6, 2019 - MATLAB
Converting KGML encoded KEGG pathways to the SIF file format
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Sep 13, 2020 - Python
An application of the rational enrichment workflow to ten subgraphs from NeuroMMSig for the Human Brain Pharmacome project (https://pharmacome.scai.fraunhofer.de)
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Jul 16, 2019 - Jupyter Notebook
Translation between CellDesigner-flavoured SBML and SBGN-ML
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Feb 26, 2021 - Java
Converting SBGN encoded pathways to the SIF file format
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Apr 22, 2020 - Python
THREE.JS GENETIC CODE NEUTRAL NETWORK EXPLORER
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Mar 17, 2017 - Jupyter Notebook
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