bacteria
Here are 199 public repositories matching this topic...
Evaluating Nanopore-based bacterial variant calling
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May 21, 2024 - Python
GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
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May 17, 2024 - Python
A simple pipeline for bacterial assembly and quality control
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May 14, 2024 - Nextflow
Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
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May 21, 2024 - Python
Build a partitioned pangenome graph from microbial genomes
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May 21, 2024 - Python
A bioinformatic toolkit to align genome assemblies into pangenome graphs
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May 12, 2024 - Julia
This repo serves as a guide for the BYU Image Segmentation group. We are attempting to identify structures in images created by Electron cryotomography.
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May 11, 2024 - Jupyter Notebook
Tesis de maestría: Asociación por aprendizaje profundo de k-meros genómicos con etiquetas ontológicas
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May 1, 2024 - Python
*Monteagudo-Cascales E., *Gumerov V.M., Fernández M., Matilla M.A., Gavira J.A., Zhulin I.B., Krell T. (2024) Ubiquitous purine sensor modulates diverse signal transduction pathways in bacteria.
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Apr 29, 2024 - Python
BSR-Based Allele Calling Algorithm
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Apr 29, 2024 - HTML
Code for group website
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Apr 25, 2024 - HTML
This repo contains my cross-validation ML analysis for training and testing co-occurrence network inference algorithms
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Apr 22, 2024 - Jupyter Notebook
Bacterial Assembly and Antimicrobial Resistance Genes In NextFlow
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Apr 22, 2024 - Nextflow
Accurate, resource-frugal and deterministic DNA sequence classifier.
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May 1, 2024 - Python
napari-findaureus: A tool designed to identify bacteria in infected bone tissue images obtained via Confocal Laser Scanning Microscopy (CLSM).
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Apr 20, 2024 - Python
Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)
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Apr 17, 2024 - Python
GET_HOMOLOGUES: a versatile software package for pan-genome analysis
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Apr 16, 2024 - Perl
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