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@Ecogenomics

Australian Centre for Ecogenomics

Popular repositories

  1. GTDBTk GTDBTk Public

    GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

    Python 431 82

  2. CheckM CheckM Public

    Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

    Python 318 73

  3. gtdb-species-clusters gtdb-species-clusters Public

    Toolkit for establishing, updating, and validating GTDB species clusters

    Python 18 3

  4. BamM BamM Public

    Metagenomics-focused BAM file manipulation

    C 15 7

  5. GTDBNCBI GTDBNCBI Public

    The GTDB provides the software infrastructure for working with a large collection of genomic resources. The major goal of this initiative is to provide a phylogenetically consistent taxonomy for ar…

    Python 9 2

  6. Mannotator Mannotator Public archive

    Microbial annotation pipeline - in progress

    Perl 4 5

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