chore: fix mamba deployment in CI (#1590)

* chore: fix mamba deployment in CI * use chown for cache files
snakemake · Apr 21, 2022 · 667ee86 · 667ee86
1 parent 8236e80
commit 667ee86
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -55,6 +55,8 @@ jobs:
         run: |
           export PATH="/usr/share/miniconda/bin:$PATH"
           conda install -c conda-forge -q mamba
+          # ensure that mamba is happy to write into the cache
+          sudo chown -R runner:docker /usr/share/miniconda/pkgs/cache
           mamba env create -q --name snakemake --file test-environment.yml
           # additionally add singularity
           # TODO remove version constraint: needed because 3.8.7 fails with missing libz: