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Added missing new files in reason.updated_input during DAG construction
Let's consider a 'A' rule that takes 'N' inputs from a 'B' rule with different wildcards. The input function for the A rule requests output files from 'B'. If a first run has already generated the output of 'A' and 'B' and if the input function of 'A' requests new input files from B not yet generated, snakemake will neither generate missing 'B' output files nor regenerate the 'A' output. However the list-input-changes is able to list correctly the missing files. The commit allows to generate missing 'B' outputs and regenerate the 'A' output.
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