Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

perf: autobump bio/hap.py/pre.py #2070

Merged
merged 1 commit into from Nov 1, 2023
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Jump to
Jump to file
Failed to load files.
Diff view
Diff view
66 changes: 66 additions & 0 deletions bio/hap.py/pre.py/environment.linux-64.pin.txt
@@ -0,0 +1,66 @@
# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
@EXPLICIT
https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81
https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2023.7.22-hbcca054_0.conda#a73ecd2988327ad4c8f2c331482917f2
https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-h41732ed_0.conda#7aca3059a1729aa76c597603f10b0dd3
https://conda.anaconda.org/conda-forge/linux-64/libgfortran4-7.5.0-h14aa051_20.tar.bz2#a072eab836c3a9578ce72b5640ce592d
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_2.conda#9172c297304f2a20134fc56c97fbe229
https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-7.5.0-h14aa051_20.tar.bz2#c3b2ad091c043c08689e64b10741484b
https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h807b86a_2.conda#e2042154faafe61969556f28bade94b9
https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d
https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-13.2.0-h807b86a_2.conda#c28003b0be0494f9a7664389146716ff
https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h7f98852_4.tar.bz2#a1fd65c7ccbf10880423d82bca54eb54
https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.20.1-hd590300_1.conda#2facbaf5ee1a56967aecaee89799160e
https://conda.anaconda.org/conda-forge/linux-64/icu-70.1-h27087fc_0.tar.bz2#87473a15119779e021c314249d4b4aed
https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.1-h166bdaf_0.tar.bz2#30186d27e2c9fa62b45fb1476b7200e3
https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.13-h166bdaf_0.tar.bz2#4b5bee2e957570197327d0b20a718891
https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-h516909a_1.tar.bz2#6f8720dff19e17ce5d48cfe7f3d2f0a3
https://conda.anaconda.org/conda-forge/linux-64/libffi-3.2.1-he1b5a44_1007.tar.bz2#11389072d7d6036fd811c3d9460475cd
https://conda.anaconda.org/conda-forge/linux-64/libnsl-2.0.1-hd590300_0.conda#30fd6e37fe21f86f4bd26d6ee73eeec7
https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.12-pthreads_hb3c22a3_1.tar.bz2#602e033fdeeae7a88dd90283aa777a1f
https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda#f36c115f1ee199da648e0597ec2047ad
https://conda.anaconda.org/conda-forge/linux-64/lzo-2.10-h516909a_1000.tar.bz2#bb14fcb13341b81d5eb386423b9d2bac
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4-h59595ed_2.conda#7dbaa197d7ba6032caf7ae7f32c1efa0
https://conda.anaconda.org/conda-forge/linux-64/openssl-1.1.1w-hd590300_0.conda#301e70057a3bd399640bb16bbdf87995
https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2#2161070d867d1b1204ea749c8eec4ef0
https://conda.anaconda.org/bioconda/linux-64/bedtools-2.31.0-hf5e1c6e_3.tar.bz2#12923179bf2aa30867534a335c8d1a46
https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-8_openblas.tar.bz2#95cee6371a5b901797075040941171f3
https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2#4d331e44109e3f0e19b4cb8f9b82f3e1
https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.51.0-hdcd2b5c_0.conda#c42b460bae0365fb9777b1ff9d09a554
https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.43.2-h2797004_0.conda#4b441a1ee22397d5a27dc1126b849edd
https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.10.0-haa6b8db_3.tar.bz2#89acee135f0809a18a1f4537390aa2dd
https://conda.anaconda.org/conda-forge/linux-64/perl-5.32.1-4_hd590300_perl5.conda#3e785bff761095eb7f8676f4694bd1b1
https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8228510_1.conda#47d31b792659ce70f470b5c82fdfb7a4
https://conda.anaconda.org/conda-forge/linux-64/tk-8.6.13-h2797004_0.conda#513336054f884f95d9fd925748f41ef3
https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.13-hd590300_5.conda#68c34ec6149623be41a1933ab996a209
https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda#04b88013080254850d6c01ed54810589
https://conda.anaconda.org/conda-forge/linux-64/boost-cpp-1.74.0-h75c5d50_8.tar.bz2#9c5996e7741d205bc76a518173ff6b82
https://conda.anaconda.org/conda-forge/linux-64/krb5-1.20.1-hf9c8cef_0.conda#5f7e9efd540d7ac4b485660231ba6150
https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-8_openblas.tar.bz2#d8e2151683bc12acffedea26eba27e0f
https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-8_openblas.tar.bz2#9a860887c77e923c2807c715a7731fb8
https://conda.anaconda.org/conda-forge/linux-64/sqlite-3.43.2-h2c6b66d_0.conda#c37b95bcd6c6833dacfd5df0ae2f4303
https://conda.anaconda.org/conda-forge/linux-64/gsl-2.7-he838d99_0.tar.bz2#fec079ba39c9cca093bf4c00001825de
https://conda.anaconda.org/conda-forge/linux-64/libcurl-7.87.0-h6312ad2_0.conda#ad07f06bd133e76e12165bc3ec2c8646
https://conda.anaconda.org/conda-forge/linux-64/python-2.7.15-h5a48372_1011_cpython.tar.bz2#d1824ac0987155f58a03b7ffda01db38
https://conda.anaconda.org/bioconda/linux-64/htslib-1.17-h6bc39ce_1.tar.bz2#ba73207904543acbaa6983975cd11c7b
https://conda.anaconda.org/conda-forge/linux-64/numpy-1.16.5-py27h95a1406_0.tar.bz2#c0f6bb7c3bd322885bcc08a8741b209c
https://conda.anaconda.org/conda-forge/linux-64/python_abi-2.7-1_cp27mu.tar.bz2#02d6ad6bce3a798e6ee85494cd9b3d8d
https://conda.anaconda.org/conda-forge/noarch/pytz-2020.1-pyh9f0ad1d_0.tar.bz2#e52abc1f0fd70e05001c1ceb2696f625
https://conda.anaconda.org/conda-forge/noarch/six-1.16.0-pyh6c4a22f_0.tar.bz2#e5f25f8dbc060e9a8d912e432202afc2
https://conda.anaconda.org/conda-forge/noarch/wheel-0.37.1-pyhd8ed1ab_0.tar.bz2#1ca02aaf78d9c70d9a81a3bed5752022
https://conda.anaconda.org/bioconda/linux-64/bcftools-1.17-h3cc50cf_1.tar.bz2#19225b40cd28ffbeaa87494b70e80928
https://conda.anaconda.org/conda-forge/linux-64/certifi-2019.11.28-py27h8c360ce_1.tar.bz2#a345324a2547908c1f9ca4b65d93f5ba
https://conda.anaconda.org/bioconda/linux-64/pysam-0.20.0-py27h7835474_0.tar.bz2#df6cd4d3635ff2a14a796c99d74fccdb
https://conda.anaconda.org/conda-forge/noarch/python-dateutil-2.8.1-py_0.tar.bz2#0d0150ed9c2d25817f5324108d3f7571
https://conda.anaconda.org/conda-forge/linux-64/python-lzo-1.12-py27h42e1302_1001.tar.bz2#964b021fbd9bf06f209e41ba9e026bed
https://conda.anaconda.org/bioconda/linux-64/samtools-1.18-hd87286a_0.tar.bz2#6b84bda89df8621b103acda1088a2d75
https://conda.anaconda.org/conda-forge/linux-64/scipy-1.2.1-py27h921218d_2.tar.bz2#86dfec20837a8d0e9f05e79d1fb9e615
https://conda.anaconda.org/bioconda/linux-64/bx-python-0.8.9-py27h54ae540_2.tar.bz2#4769ec5c6b0a963b71497d3c0d4e5ce1
https://conda.anaconda.org/conda-forge/linux-64/setuptools-44.0.0-py27_0.tar.bz2#a1dcb0ca393c777d0611faf5b86602be
https://conda.anaconda.org/conda-forge/linux-64/nose-1.3.7-py27h8c360ce_1004.tar.bz2#9d7865ecd73c0884d810c7d4148410f7
https://conda.anaconda.org/conda-forge/linux-64/pandas-0.24.2-py27hb3f55d8_0.tar.bz2#95059d9a72cf322d248578533449d552
https://conda.anaconda.org/conda-forge/noarch/pip-20.1.1-pyh9f0ad1d_0.tar.bz2#cd67a20c73ff2514cf5f34cae28fc867
https://conda.anaconda.org/bioconda/linux-64/pybedtools-0.8.2-py27h6a42192_1.tar.bz2#a9f0f778c48912bc43bdd69baaf3d130
https://conda.anaconda.org/bioconda/linux-64/hap.py-0.3.15-py27hcb73b3d_0.tar.bz2#26aae8f7db824629220c004d58fd54ad