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fix: remove debug code from vep wrapper
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johanneskoester committed Sep 1, 2022
1 parent bf7627e commit c58334b
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion bio/vep/annotate/wrapper.py
Expand Up @@ -60,7 +60,7 @@ def get_only_child_dir(path):
cache = (
"--offline --cache --dir_cache {cache} --cache_version {release} --species {species} --assembly {build}"
).format(cache=cache, release=release, build=build, species=species)
shell("conda list")

shell(
"(bcftools view '{snakemake.input.calls}' | "
"vep {extra} {fork} "
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