perf: autobump bio/gatk/applybqsrspark (#2588)

Automatic bump of bio/gatk/applybqsrspark.

---------

Co-authored-by: snakedeploy-bot[bot] <115615832+snakedeploy-bot[bot]@users.noreply.github.com>

bio/gatk/applybqsrspark/environment.linux-64.pin.txt

@@ -25,12 +25,12 @@ https://conda.anaconda.org/conda-forge/linux-64/graphite2-1.3.13-h58526e2_1001.t
 https://conda.anaconda.org/conda-forge/linux-64/icu-73.2-h59595ed_0.conda#cc47e1facc155f91abd89b11e48e72ff
 https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.1-h166bdaf_0.tar.bz2#30186d27e2c9fa62b45fb1476b7200e3
 https://conda.anaconda.org/conda-forge/linux-64/lerc-4.0.0-h27087fc_0.tar.bz2#76bbff344f0134279f225174e9064c8f
-https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.19-hd590300_0.conda#1635570038840ee3f9c71d22aa5b8b6d
+https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.18-h0b41bf4_0.conda#6aa9c9de5542ecb07fdda9ca626252d8
 https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-hd590300_2.conda#172bf1cd1ff8629f2b1179945ed45055
 https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.5.0-hcb278e6_1.conda#6305a3dd2752c76335295da4e581f2fd
 https://conda.anaconda.org/conda-forge/linux-64/libffi-3.4.2-h7f98852_5.tar.bz2#d645c6d2ac96843a2bfaccd2d62b3ac3
 https://conda.anaconda.org/conda-forge/linux-64/libiconv-1.17-hd590300_2.conda#d66573916ffcf376178462f1b61c941e
-https://conda.anaconda.org/conda-forge/linux-64/libjpeg-turbo-3.0.0-hd590300_1.conda#ea25936bb4080d843790b586850f82b8
+https://conda.anaconda.org/conda-forge/linux-64/libjpeg-turbo-2.1.5.1-hd590300_1.conda#323e90742f0f48fc22bea908735f55e6
 https://conda.anaconda.org/conda-forge/linux-64/libnsl-2.0.1-hd590300_0.conda#30fd6e37fe21f86f4bd26d6ee73eeec7
 https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.38.1-h0b41bf4_0.conda#40b61aab5c7ba9ff276c41cfffe6b80b
 https://conda.anaconda.org/conda-forge/linux-64/libwebp-base-1.3.2-hd590300_0.conda#30de3fd9b3b602f7473f30e684eeea8c
@@ -67,11 +67,11 @@ https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda#04b8
 https://conda.anaconda.org/conda-forge/linux-64/freetype-2.12.1-h267a509_2.conda#9ae35c3d96db2c94ce0cef86efdfa2cb
 https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.2-h659d440_0.conda#cd95826dbd331ed1be26bdf401432844
 https://conda.anaconda.org/conda-forge/linux-64/libglib-2.78.3-h783c2da_0.conda#9bd06b12bbfa6fd1740fd23af4b0f0c7
-https://conda.anaconda.org/conda-forge/linux-64/libtiff-4.6.0-ha9c0a0a_2.conda#55ed21669b2015f77c180feb1dd41930
+https://conda.anaconda.org/conda-forge/linux-64/libtiff-4.6.0-h8b53f26_0.conda#097c175e54beba8b42dcc5dd49299ca1
 https://conda.anaconda.org/conda-forge/linux-64/python-3.12.1-hab00c5b_1_cpython.conda#0bab699354cbd66959550eb9b9866620
 https://conda.anaconda.org/conda-forge/linux-64/xorg-libx11-1.8.7-h8ee46fc_0.conda#49e482d882669206653b095f5206c05b
 https://conda.anaconda.org/conda-forge/linux-64/fontconfig-2.14.2-h14ed4e7_0.conda#0f69b688f52ff6da70bccb7ff7001d1d
-https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.16-hb7c19ff_0.conda#51bb7010fc86f70eee639b4bb7a894f5
+https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.15-h7f713cb_2.conda#9ab79924a3760f85a799f21bc99bd655
 https://conda.anaconda.org/conda-forge/linux-64/libcups-2.3.3-h4637d8d_4.conda#d4529f4dff3057982a7617c7ac58fde3
 https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.5.0-hca28451_0.conda#7144d5a828e2cae218e0e3c98d8a0aeb
 https://conda.anaconda.org/conda-forge/noarch/setuptools-69.0.3-pyhd8ed1ab_0.conda#40695fdfd15a92121ed2922900d0308b
@@ -82,11 +82,11 @@ https://conda.anaconda.org/conda-forge/linux-64/xorg-libxfixes-5.0.3-h7f98852_10
 https://conda.anaconda.org/conda-forge/linux-64/xorg-libxrender-0.9.11-hd590300_0.conda#ed67c36f215b310412b2af935bf3e530
 https://conda.anaconda.org/conda-forge/linux-64/xorg-libxt-1.3.0-hd590300_1.conda#ae92aab42726eb29d16488924f7312cb
 https://conda.anaconda.org/conda-forge/linux-64/cairo-1.18.0-h3faef2a_0.conda#f907bb958910dc404647326ca80c263e
-https://conda.anaconda.org/bioconda/linux-64/htslib-1.19-h81da01d_0.tar.bz2#70a467e903079d86316ed9ecff262582
+https://conda.anaconda.org/bioconda/linux-64/htslib-1.19.1-h81da01d_0.tar.bz2#a2b558d267544e66aef5551728b3960a
 https://conda.anaconda.org/conda-forge/noarch/pip-23.3.2-pyhd8ed1ab_0.conda#8591c748f98dcc02253003533bc2e4b1
 https://conda.anaconda.org/conda-forge/linux-64/xorg-libxi-1.7.10-h7f98852_0.tar.bz2#e77615e5141cad5a2acaa043d1cf0ca5
 https://conda.anaconda.org/conda-forge/linux-64/harfbuzz-8.3.0-h3d44ed6_0.conda#5a6f6c00ef982a9bc83558d9ac8f64a0
-https://conda.anaconda.org/bioconda/linux-64/samtools-1.19-h50ea8bc_0.tar.bz2#5c9f97a74ce507ce33d0f17d81a92fb3
+https://conda.anaconda.org/bioconda/linux-64/samtools-1.19.2-h50ea8bc_0.tar.bz2#0150123d5e95c24ba378bf2ab645831b
 https://conda.anaconda.org/conda-forge/linux-64/xorg-libxtst-1.2.3-h7f98852_1002.tar.bz2#a220b1a513e19d5cb56c1311d44f12e6
-https://conda.anaconda.org/conda-forge/linux-64/openjdk-17.0.9-h4260e57_0.conda#a41e9af4d762e3511a58dede4496c171
+https://conda.anaconda.org/conda-forge/linux-64/openjdk-17.0.8-hbf40d96_2.conda#04f9cfc4488737bae2be1bd35ac0b3d4
 https://conda.anaconda.org/bioconda/noarch/gatk4-4.4.0.0-py36hdfd78af_0.tar.bz2#ab2bdd8fd02976636a45e229db3de42c

bio/gatk/applybqsrspark/environment.yaml

@@ -5,4 +5,4 @@ channels:
 dependencies:
   - gatk4 =4.4.0.0
   - snakemake-wrapper-utils =0.6.2
-  - samtools =1.19
+  - samtools =1.19.2