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Add nf-prov #2455

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maxulysse
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PR checklist

  • This comment contains a description of changes (with reason)
  • CHANGELOG.md is updated
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated

@ewels
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ewels commented Sep 29, 2023

Good, though I wonder if it's worth trialling in a pipeline or two for a while before merging into the template? Just because the plugin is very new and not super well tested yet.

Could arguably do this alongside merging to the template I guess, so maybe no need to hold this up.

Co-authored-by: Phil Ewels <phil.ewels@seqera.io>
@maxulysse
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Good, though I wonder if it's worth trialling in a pipeline or two for a while before merging into the template? Just because the plugin is very new and not super well tested yet.

Could arguably do this alongside merging to the template I guess, so maybe no need to hold this up.

I can test in Sarek

@maxulysse
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Good, though I wonder if it's worth trialling in a pipeline or two for a while before merging into the template? Just because the plugin is very new and not super well tested yet.
Could arguably do this alongside merging to the template I guess, so maybe no need to hold this up.

I can test in Sarek

nf-core/sarek#1259

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codecov bot commented Sep 29, 2023

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (7e5013b) 75.06% compared to head (1fa4aed) 70.62%.
Report is 5 commits behind head on dev.

❗ Current head 1fa4aed differs from pull request most recent head 79f3c58. Consider uploading reports for the commit 79f3c58 to get more accurate results

Additional details and impacted files
@@            Coverage Diff             @@
##              dev    #2455      +/-   ##
==========================================
- Coverage   75.06%   70.62%   -4.45%     
==========================================
  Files          85       88       +3     
  Lines        9376     9493     +117     
==========================================
- Hits         7038     6704     -334     
- Misses       2338     2789     +451     

☔ View full report in Codecov by Sentry.
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@jfy133
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jfy133 commented Sep 29, 2023

Works in taxprofiler 👍

@maxulysse maxulysse mentioned this pull request Sep 29, 2023
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4 participants