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Issues list

Abundance plots for qiime2 results without metadata provided enhancement New feature or request
#738 opened May 7, 2024 by SergeWielhouwer 2.10.0
2
multi-region analysis: sidle/reconstructed/reconstructed_merged.tsv OCCATIONALLY mis-formatted bug Something isn't working
#736 opened Apr 18, 2024 by d4straub
Accessing 16S gene identifiers enhancement New feature or request
#734 opened Apr 12, 2024 by annotatebio
13
Misleading error message when samples are not passing filterandtrim bug Something isn't working
#733 opened Apr 11, 2024 by d4straub 2.10.0
ERROR: R_HOME ('/usr/local/lib/R') not found bug Something isn't working
#732 opened Apr 9, 2024 by WangLab-SCSIO
4
ANCOM-BC for differentially abundant taxa enhancement New feature or request
#731 opened Apr 8, 2024 by enriiquee
1
12S taxonomic classification databases enhancement New feature or request
#707 opened Feb 28, 2024 by emmastrand
3
Allow to analyse 454 sequencing data enhancement New feature or request
#669 opened Dec 1, 2023 by d4straub
2
Add blast-consensus support to Ampliseq
#663 opened Nov 28, 2023 by MatthewJM96
1
Adding the new Greengenes2 database for classification enhancement New feature or request
#658 opened Nov 9, 2023 by aimirza
2
A feature to remove taxa found in controls enhancement New feature or request
#634 opened Sep 5, 2023 by skose82
5
Add vsearch uchime_denovo for chimera removal (or flagging) enhancement New feature or request
#631 opened Aug 30, 2023 by andand
2
Add sintax support for all available databases enhancement New feature or request
#618 opened Aug 17, 2023 by jtangrot
1
Potential problem with demultiplexing and proposed solution enhancement New feature or request
#613 opened Aug 2, 2023 by a4000
1
Proposal: Seqkit stats when demultiplexing enhancement New feature or request
#611 opened Aug 2, 2023 by a4000
2
Proposal: Lowest Common Ancestor (LCA) module for assigning taxonomy enhancement New feature or request
#610 opened Aug 2, 2023 by a4000
2
Proposal: Blastn as an alternative classifier enhancement New feature or request
#608 opened Aug 2, 2023 by a4000
6
Phylogenetic placement part 2 enhancement New feature or request
#562 opened Mar 27, 2023 by erikrikarddaniel
Phylo placement part 1 enhancement New feature or request
#561 opened Mar 27, 2023 by erikrikarddaniel
Cut ASVs for taxonomy assignment enhancement New feature or request not urgent
#225 opened Feb 23, 2021 by erikrikarddaniel
5
Add demultiplexing step enhancement New feature or request
#64 opened Jan 18, 2019 by DiegoBrambilla
12
ProTip! Exclude everything labeled bug with -label:bug.