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Releases: ggobi/ggally

GGally 2.2.1

14 Feb 17:29
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GGally 2.2.0

22 Nov 14:22
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Bug fixes

  • Removed dependency on reshape2 (#475)
  • Reverse ordering of y-axis in ggally_count() (#420)
  • Facets ordering in ggcoef_compare() (#426)
  • Fix in ggcoef_compare() when using tidy selectors for
    no_reference_row (#430)
  • Fix in ggcoef_compare() regarding no_reference_row option (#430)
  • Fix in ggcoef_compare() with an include argument (#447)
  • New default tidier for ggcoef_model(), now using
    broom.helpers::tidy_with_broom_or_parameters() (#432)
  • Re-export methods from and redirect vignettes to the {ggstats} package (#452, #457)
  • Replaced ..scaled.. with after_stat(scaled) in ggscatmat (#467)

v2.1.2

21 Jun 20:28
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Bug fixes

  • Replace ggplot2 usage of *_guide = FALSE with *_guide = "none" (@larmarange, #418)
  • Require network >= 1.17.1 (#418)

v2.1.1

08 Mar 14:19
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Bug fixes

  • Ignore colour aesthetic if all values are NA. (@larmarange, #404)
  • Avoid all duplicates within stat_cross(). (@larmarange, #402)
  • Avoid an error when tidiers do not return p-values. (@larmarange, #400)
  • Suggest emmeans to allow ggcoef() example to execute. (#407)

v2.1.0

11 Jan 17:11
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GGally 2.1.0

Breaking changes

  • Following version 7.0.0 of broom, computed residuals in stat_cross()
    are now named "resid" and "std.resid". cells and fill arguments
    of ggally_crosstable() and ggtable() have been updated accordingly
    (@larmarange, #391)

Other changes

  • ggcoef() redesign based on broom.helpers with four new functions:
    ggcoef_model(), ggcoef_compare(), ggcoef_multinom() and ggcoef_plot()
    (more informations in the dedicated vignette, @larmarange, #392)
  • New geometries: geom_stripped_rows() and geom_stripped_cols()
    (#392, @larmarange)
  • New option reverse_fill_labels for ggally_colbar()
    and ggally_rowbar() (@larmarange, #374)
  • stat_prop() now accepts a x or a y aesthetic (#395, @larmarange)
  • Temporarily not listening to ggally_statistic(family) to avoid monospaced font issues. See #373 for more details. (#387)

v2.0.0

11 Jan 17:09
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GGally

New Vignettes

New functions

ggbivariate() (@larmarange, #324)

ggtable() (@larmarange, #351)

add_to_ggmatrix() (#362)

  • Add ggplot2 objects to ggmatrix objects at selected locations
  • Locations can be rows, columns, matrices, or other shorthand values.

ggally_autopoint(), ggally_autopointDiag() (@larmarange, #325)

  • Make scatterplots compatible with both continuous and categorical variables using ggforce::geom_autopoint().

ggally_colbar(), ggally_rowbar() (@larmarange, #324)

  • Plot column or row percentage using bar plots.

ggally_count(), ggally_countDiag() (@larmarange, #321)

  • Plot the number of observations by using rectangles with proportional areas.

ggally_cross() (@larmarange, #326)

  • Plot the number of observations by using square points with proportional areas.

ggally_crosstable() (@larmarange, #351)

  • Display a cross-tabulated table.

ggally_statistic() (#327)

  • A generalized version of ggally_cor()
  • Use this method to create functions similar to ggally_cor() that return any text value given and x and y vector of data

ggally_summarise_by() (@larmarange, #325)

  • Display summary statistics of a continuous variable for each value of a discrete variable.

ggally_table() (@larmarange, #326)

  • Plot the number of observations as a table.

ggally_trends() (@larmarange, #333)

  • Plot trends using line plots.

signif_stars() (@larmarange, #327)

  • Return the appropriate number of significance stars as a character vector for the provided numeric input values.

New ggplot2 plot statistics:

stat_cross() (@larmarange, #326)

  • Computes statistics of a 2-dimensional matrix using broom::augment.htest.

stat_prop() (@larmarange, #324)

  • Compute proportions according to custom denominator.

stat_weighted_mean() (@larmarange, #333)

  • Compute the mean of y aesthetic for each unique value of x, taking into account weight aesthetic if provided.

Major updates

ggally_cor() (#327)

  • New implementation using ggally_statistic()
  • Will now hide the grid by default and add a border (displayGrid = FALSE)
  • Added the ability to display significance stars (stars = TRUE)
  • Alignment has been fixed so both short and long names should be displayed within view. alignPercent now corresponds to the center of the text.
  • Added the ability to separate the arguments sent to the title and the groups (title_args and group_args)
  • Digits now represents the total number of digits after the decimal place.
  • To use the old version, change your ggally_cor() function calls to ggally_cor_v1_5().
  • Previously deprecated parameters have been removed

Website

  • Updated to use pkgdown (#335)

Features and bug fixes:

ggpairs() (#331)

  • New proportion argument to control relative size of sub-plots
  • option proportion = "auto" for automatic guess based on the number of levels for discrete variables

ggduo() (#331)

  • New xProportion and yProportion arguments to control relative size of sub-plots
  • Set option xProportion = "auto" and yProportion = "auto" for automatic guess based on the number of levels for discrete variables

ggscatmat()

  • lowertriangle() now preallocates it's memory usage for a 2-5x speed improvement. (@vlepori, #328)
  • Fixed facet'ing error where the factor order was not preserved. This error caused the facets to be alphabetically sorted, cause plots to appear in unexpected locations. (#355)

v1.5.0

25 Mar 18:17
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GGally 1.5.0

  • Updated to work with ggplot2 v3.3.0 (#308)

ggnet and ggnet2

  • Fixed some logic bugs from newer R versions

ggally_box and ggally_dot

  • Label now appears axis and is displayed in a plot matrix. (#253)

ggsurv

  • Provide sensible legend values when multiple factors are present. (#310)

ggally_cor

  • Added displayGrid argument to turn of the background grid. (#312)

v1.3.2

03 Aug 00:51
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GGally 1.3.2

ggpairs and ggduo

  • Removed warning where pure numeric names gave a warning (#238, @lepennec)
  • Fixed ordering issue with horizontal boxplots (#239)

ggparcoord

  • Fixed missing x aes requirement when shadebox is provided (#237, @treysp)

Package

  • Made igraph a non required dependency for tests (#240)

v1.3.1

08 Jun 17:11
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GGally 1.3.1

Added new dataset psychademic

  • See ?psychademic for more details
  • (And updated the broken UCLA links)

Added original ggmatrix theme

  • added function to set theme to have clear strip background and rearrange the strip positions
  • added parameter switch to ggmatrix (and friends) to allow for strip repositioning. See ?ggplot::facet_grid for more documentation on switch (#223, #224)

ggsurv error reporting

  • removed a one error check that is covered in other places (#222)

+.gg

  • allow to add a list of items to a ggmatrix (#228)

ggmatrix.print

  • fix strip issues with ggplot2 name update

v1.3.0

14 Nov 16:23
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GGally 1.3.0

ggmatrix.print - massive update!

  • Now prints with a ggplot2 facet'ed structure
  • Column titles are now placed in the strip of a plot matrix
  • If there are 16 plots or more, a progress bar is displayed automatically (if interactive). Please look at the documentation for ggmatrix_gtable more details.

ggmatrix legend

  • A legend may be added with the legend parameter in ggduo, ggpairs, and ggmatrix
  • May specify a (length two) numeric plot coordinate
  • May specify a (length one) numeric plot position
  • May specify a legend object retrieved from grab_legend

ggnostic - New function!

  • Produces a ggmatrix of diagnostic plots from a model object
  • Uses broom to retrieve model information
  • Each column of the plot matrix is a predictor variable. The rows can display the response variables, fitted points, residuals, standardized residuals, leave one out model sigma values, diagonals of the hat matrix, and cook's distance for each point.

ggfacet - New function!

  • Produces single ggplot2 object
  • interface is very similar to ggduo and ggpairs

fn_switch - New function!

  • Provide many functions in a list but only call one function at run time according to a mapping value
  • Useful for ggnostic for different behavior depending on the y variable
  • Allows for a 'default' value for the default switch case

ggmatrix - allow custom labellers for facet labels

  • Added labeller parameter which is supplied to ggplot2::facet_grid()
  • Allows for labels with plotmath expressions

ggmatrix and ggplot2::last_plot()

  • If a ggmatrix object is printed, ggplot2::last_plot() will return the plot matrix

ggmatrix and ggplot2 labels

  • ggplot2::labs +'ed to a ggmatrix object
  • ggplot2::xlab and ggplot2::ylab may be +'ed to a ggmatrix object
  • ggplot2::ggtitle +'ed to a ggmatrix object
  • (anything that returns a class of "labels" may be added to a ggmatrix object)

ggmatrix and ggplot2::ggsave()

  • ggsave now works with ggmatrix objects

ggpairs and ggduo check for cardinality (#197)

  • Before creating a ggmatrix object, a check is made for character/factor columns
  • If there are more than 15 (default) unique combinations, an error is thrown.
  • Setting cardinality_threshold parameter to a higher value can fix the problem (knowing single cell plots may take more time to produce)
  • Setting cardinality_threshold parameter to NULL can stop the check

ggmatrix plot proportions

  • ggmatrix can set the plot proportions with the parameters xProportions and yProportions
  • These will change the relative size of the plot panels produced.

ggally_cor colour aesthetic

  • color must be a non-numeric value

ggsurv

  • added boolean to allow for legend to not be sorted
  • fixed bug where censored points with custom color didn't match properly (#185)

Vignettes

ggally_box_no_facet and ggally_dot_no_facet

  • New methods added as defaults to pair with new ggmatrix print method