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291 Open 313 Closed
291 Open 313 Closed
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Issues list

Perform gseaplot2 using seurat DEG output.
#693 opened May 9, 2024 by synatkeamsk
How do I change the width of each coloum in the heatmap in the treeplot?
#692 opened May 8, 2024 by CyrusWang57
compareCluster - Error in check_gene_id - but work perfectly with standar procedure (not using compareCluster)
#691 opened Apr 27, 2024 by philousap
1
All p-values are equal to 1
#690 opened Apr 22, 2024 by MyBiscuit
1
enrichKEGG "No gene can be mapped"
#689 opened Apr 19, 2024 by dengzf2021
2
OrgDb for maize
#687 opened Apr 18, 2024 by enriquepola1996
1
ont = "BP" in enricher () function
#686 opened Apr 18, 2024 by enriquepola1996
1
gson 格式在最新版 enrichKEGG中出错
#685 opened Apr 17, 2024 by Shuixin-Li
4
Error in testForValidKeytype(x, keytype) : Invalid keytype: GOALL. Please use the keytypes method to see a listing of valid arguments.
#684 opened Apr 12, 2024 by lifannn11
1
something wrong of setReadable
#683 opened Apr 11, 2024 by williambi1
6
Count duplicate K Numbers (KEGG) for enrichKEGG?
#681 opened Apr 8, 2024 by diefuechsin
How to combine different compareCluster results?
#678 opened Mar 28, 2024 by Kyeongmi-Lee
1
How to split the results of compareCluster?
#677 opened Mar 21, 2024 by Ldec12
1
heatplot function; color scale is switched
#676 opened Mar 20, 2024 by zellerivo
1
How to generate gseaplots from the result of compareCluster gseaGO or gseaKEGG functions?
#673 opened Mar 9, 2024 by JiahuaQu
2
problem in run compareCluster
#669 opened Feb 20, 2024 by gongxin8888
8 tasks
4
How to color code cnetplot nodes from enrichrResult data
#667 opened Feb 14, 2024 by hlnicholls
4
Trouble with gseKEGG on mac sonoma 14.2
#666 opened Feb 7, 2024 by annecar
1
Not able to install clusterProfiler on Colab
#665 opened Feb 5, 2024 by pmhchang
3
GSEA long time no response
#659 opened Jan 15, 2024 by Xingsongli
20
Emmaplot with the top activated and supressed from dotplot?
#658 opened Jan 14, 2024 by Leandromvelez
4
When there's only one term ID in the dataframe passed as TERM2GENE in enricher
#657 opened Jan 11, 2024 by mansi-aggarwal-2504
compareCluster does not give a warning/message that numeric universe is ignored for fun = "enrichGO"
#654 opened Jan 5, 2024 by IwanParf
How to use compareCluster for GSEA on the Msigdb database?
#653 opened Dec 27, 2023 by Ldec12
4
gseKEGG()函数运行时出错
#652 opened Dec 26, 2023 by ZhanshenWu
6
ProTip! no:milestone will show everything without a milestone.